RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 AARDQ4LEZ3 155 aa10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 UNQ9165/PRO28630Q6UXU0 137 aa10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 C6orf223Q8N319 242 aa10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 SYT8Q8NBV8 401 aa10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 LHFPL5Q8TAF8 219 aa10.6□□□□□ -0.71
CTHRC1-201ENST00000330295 ELOA3CA0A087WX78 387 aaPredicted RBP10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 A0A0G2JRQ6 117 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 A0A1B0GU03 582 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 LINC00854A0A1B0GVQ3 168 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 I3L2K1 104 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 MIFP14174 115 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 KRTAP10-2P60368 255 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 SMCO1Q147U7 214 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 LAMTOR1Q6IAA8 161 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 LINC00299Q6ZSB3 139 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 ZNF767PQ75MW2 155 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 OR1S1Q8NH92 325 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 ZNF503Q96F45 646 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 C20orf24Q9BUV8 137 aa10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 ZNF436Q9C0F3 470 aaPredicted RBP10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 DAZ1Q9NQZ3 744 aaKnown RBP10.59□□□□□ -0.71
CTHRC1-201ENST00000330295 IGHV3-35A0A0C4DH35 117 aa10.58□□□□□ -0.72
CTHRC1-201ENST00000330295 YIF1AO95070 293 aa10.58□□□□□ -0.72
CTHRC1-201ENST00000330295 SFT2D2O95562 160 aa10.58□□□□□ -0.72
CTHRC1-201ENST00000330295 OPRK1P41145 380 aa10.58□□□□□ -0.72
CTHRC1-201ENST00000330295 SUPT4H1P63272 117 aaKnown RBP10.58□□□□□ -0.72
CTHRC1-201ENST00000330295 BAK1Q16611 211 aa10.58□□□□□ -0.72
CTHRC1-201ENST00000330295 LYZL2Q7Z4W2 148 aa10.58□□□□□ -0.72
CTHRC1-201ENST00000330295 S100ZQ8WXG8 99 aa10.58□□□□□ -0.72
CTHRC1-201ENST00000330295 CELA1Q9UNI1 258 aa10.58□□□□□ -0.72
CTHRC1-201ENST00000330295 K7EMT4 169 aa10.57□□□□□ -0.72
CTHRC1-201ENST00000330295 NDUFB6O95139 128 aa10.57□□□□□ -0.72
CTHRC1-201ENST00000330295 RNASE2P10153 161 aaKnown RBP10.57□□□□□ -0.72
CTHRC1-201ENST00000330295 IL7P13232 177 aa10.57□□□□□ -0.72
CTHRC1-201ENST00000330295 ATP5IP56385 69 aaPredicted RBP10.57□□□□□ -0.72
CTHRC1-201ENST00000330295 ETFRF1Q6IPR1 90 aa10.57□□□□□ -0.72
CTHRC1-201ENST00000330295 LINC00528Q8N1L1 170 aa10.57□□□□□ -0.72
CTHRC1-201ENST00000330295 RNASEH2CQ8TDP1 164 aaKnown RBP10.57□□□□□ -0.72
CTHRC1-201ENST00000330295 TMEM190Q8WZ59 177 aa10.57□□□□□ -0.72
CTHRC1-201ENST00000330295 TMED3Q9Y3Q3 217 aa10.57□□□□□ -0.72
CTHRC1-201ENST00000330295 C15orf62A8K5M9 175 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 MED6O75586 246 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 CTSGP08311 255 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 XGP55808 180 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 PPP1R1AQ13522 171 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 NMSQ5H8A3 153 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 LRTM2Q8N967 370 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 SLC24A4Q8NFF2 622 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 COQ8AQ8NI60 647 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 GINS3Q9BRX5 216 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 CCDC32Q9BV29 185 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 PRR13Q9NZ81 148 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 MDFICQ9P1T7 246 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 U3KQ87 197 aa10.56□□□□□ -0.72
CTHRC1-201ENST00000330295 TRAV30A0A087WSZ9 112 aa10.55□□□□□ -0.72
CTHRC1-201ENST00000330295 IGHV3-48P01763 117 aa10.55□□□□□ -0.72
CTHRC1-201ENST00000330295 SLC25A4P12235 298 aa10.55□□□□□ -0.72
CTHRC1-201ENST00000330295 SLC25A6P12236 298 aa10.55□□□□□ -0.72
CTHRC1-201ENST00000330295 NPY1RP25929 384 aa10.55□□□□□ -0.72
CTHRC1-201ENST00000330295 C4orf46Q504U0 113 aa10.55□□□□□ -0.72
CTHRC1-201ENST00000330295 C2orf83Q53S99 150 aa10.55□□□□□ -0.72
CTHRC1-201ENST00000330295 DTD1Q8TEA8 209 aa10.55□□□□□ -0.72
CTHRC1-201ENST00000330295 HSPB7Q9UBY9 170 aa10.55□□□□□ -0.72
CTHRC1-201ENST00000330295 FAM90A26D6RGX4 464 aa10.54□□□□□ -0.72
CTHRC1-201ENST00000330295 RPP30P78346 268 aaKnown RBP10.54□□□□□ -0.72
CTHRC1-201ENST00000330295 BSXQ3C1V8 233 aa10.54□□□□□ -0.72
CTHRC1-201ENST00000330295 ZNF600Q6ZNG1 722 aa10.54□□□□□ -0.72
CTHRC1-201ENST00000330295 OR4X1Q8NH49 305 aa10.54□□□□□ -0.72
CTHRC1-201ENST00000330295 NARS2Q96I59 477 aaKnown RBP10.54□□□□□ -0.72
CTHRC1-201ENST00000330295 CIB3Q96Q77 187 aaPredicted RBP10.54□□□□□ -0.72
CTHRC1-201ENST00000330295 SDHCQ99643 169 aaPredicted RBP10.54□□□□□ -0.72
CTHRC1-201ENST00000330295 BATF3Q9NR55 127 aa10.54□□□□□ -0.72
CTHRC1-201ENST00000330295 PLA2G2DQ9UNK4 145 aa10.54□□□□□ -0.72
CTHRC1-201ENST00000330295 TRAV14DV4A0A0A6YYC5 116 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 NBDYA0A0U1RRE5 68 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 C9orf170A2RU37 121 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 A6NHS1 94 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 ZNF705EA8MWA4 302 aaPredicted RBP10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 F8W735 103 aaPredicted RBP10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 LYRM1O43325 122 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 CLN5O75503 358 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 NXPH3O95157 252 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 TMEM50AO95807 157 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 CD5P06127 495 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 HOXB5P09067 269 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 CMC4P56277 68 aaPredicted RBP10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 MZT2BQ6NZ67 158 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 FAM210BQ96KR6 192 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 RBKSQ9H477 322 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 X6R8D5 127 aa10.53□□□□□ -0.72
CTHRC1-201ENST00000330295 OR4E1P0C645 316 aa10.52□□□□□ -0.73
CTHRC1-201ENST00000330295 FAM3BP58499 235 aaPredicted RBP10.52□□□□□ -0.73
CTHRC1-201ENST00000330295 RAB11AP62491 216 aa10.52□□□□□ -0.73
CTHRC1-201ENST00000330295 TMEM116Q8NCL8 245 aa10.52□□□□□ -0.73
CTHRC1-201ENST00000330295 WDR12Q9GZL7 423 aaKnown RBP10.52□□□□□ -0.73
CTHRC1-201ENST00000330295 TMEM231Q9H6L2 316 aa10.52□□□□□ -0.73
CTHRC1-201ENST00000330295 PTTG2Q9NZH5 202 aa10.52□□□□□ -0.73
CTHRC1-201ENST00000330295 SMPXQ9UHP9 88 aa10.52□□□□□ -0.73
CTHRC1-201ENST00000330295 A0A1W2PS18 150 aa10.51□□□□□ -0.73
CTHRC1-201ENST00000330295 DHRS2Q13268 280 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms