RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CA7P43166 264 aa15.96■□□□□ 0.14
SOX2-201ENST00000325404 LYPD2Q6UXB3 125 aa15.96■□□□□ 0.14
SOX2-201ENST00000325404 NIT1Q86X76 327 aa15.96■□□□□ 0.14
SOX2-201ENST00000325404 TMEM116Q8NCL8 245 aa15.96■□□□□ 0.14
SOX2-201ENST00000325404 NUP35Q8NFH5 326 aa15.96■□□□□ 0.14
SOX2-201ENST00000325404 C18orf32Q8TCD1 76 aa15.96■□□□□ 0.14
SOX2-201ENST00000325404 C22orf15Q8WYQ4 148 aa15.96■□□□□ 0.14
SOX2-201ENST00000325404 TMEM190Q8WZ59 177 aa15.96■□□□□ 0.14
SOX2-201ENST00000325404 ATG101Q9BSB4 218 aa15.96■□□□□ 0.14
SOX2-201ENST00000325404 FAM103A1Q9BTL3 118 aaKnown RBP15.96■□□□□ 0.14
SOX2-201ENST00000325404 RNF114Q9Y508 228 aa15.96■□□□□ 0.14
SOX2-201ENST00000325404 SLC25A17O43808 307 aa15.95■□□□□ 0.14
SOX2-201ENST00000325404 RPLP1P05386 114 aaKnown RBP15.95■□□□□ 0.14
SOX2-201ENST00000325404 PLP1P60201 277 aa15.95■□□□□ 0.14
SOX2-201ENST00000325404 MRPL36Q9P0J6 103 aaKnown RBP15.95■□□□□ 0.14
SOX2-201ENST00000325404 POLEQ07864 2286 aa15.95■□□□□ 0.14
SOX2-201ENST00000325404 CORTO00230 105 aa15.95■□□□□ 0.14
SOX2-201ENST00000325404 IGHV1-8P0DP01 117 aa15.95■□□□□ 0.14
SOX2-201ENST00000325404 SLAQ13239 276 aa15.95■□□□□ 0.14
SOX2-201ENST00000325404 NHLRC2Q8NBF2 726 aa15.95■□□□□ 0.14
SOX2-201ENST00000325404 CCL17Q92583 94 aa15.95■□□□□ 0.14
SOX2-201ENST00000325404 TMEM68Q96MH6 324 aa15.95■□□□□ 0.14
SOX2-201ENST00000325404 CA1P00915 261 aaPredicted RBP15.94■□□□□ 0.14
SOX2-201ENST00000325404 MFAP2P55001 183 aa15.94■□□□□ 0.14
SOX2-201ENST00000325404 CT83Q5H943 113 aa15.94■□□□□ 0.14
SOX2-201ENST00000325404 RNASE6Q93091 150 aaKnown RBP15.94■□□□□ 0.14
SOX2-201ENST00000325404 CTSZQ9UBR2 303 aa15.94■□□□□ 0.14
SOX2-201ENST00000325404 CHD8Q9HCK8 2581 aa15.94■□□□□ 0.14
SOX2-201ENST00000325404 C22orf46C9J442 243 aa15.94■□□□□ 0.14
SOX2-201ENST00000325404 CRYGBP07316 175 aa15.94■□□□□ 0.14
SOX2-201ENST00000325404 UBE2G1P62253 170 aa15.94■□□□□ 0.14
SOX2-201ENST00000325404 ARL6IP6Q8N6S5 226 aa15.94■□□□□ 0.14
SOX2-201ENST00000325404 GPR82Q96P67 336 aa15.94■□□□□ 0.14
SOX2-201ENST00000325404 SSBP3Q9BWW4 388 aaPredicted RBP15.94■□□□□ 0.14
SOX2-201ENST00000325404 NBEAQ8NFP9 2946 aa15.94■□□□□ 0.14
SOX2-201ENST00000325404 PMCHP20382 165 aa15.93■□□□□ 0.14
SOX2-201ENST00000325404 MLST8Q9BVC4 326 aa15.93■□□□□ 0.14
SOX2-201ENST00000325404 TMEM133Q9H2Q1 129 aa15.93■□□□□ 0.14
SOX2-201ENST00000325404 SOX21Q9Y651 276 aaPredicted RBP15.93■□□□□ 0.14
SOX2-201ENST00000325404 ZNF492Q9P255 531 aa15.93■□□□□ 0.14
SOX2-201ENST00000325404 TRAV34A0A0B4J273 112 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 A0A1B0GXF2 115 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 C3orf79P0CE67 100 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 C11orf42Q8N5U0 333 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 HYPMO75409 117 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 TOMM40O96008 361 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 RPL27AP46776 148 aaKnown RBP15.92■□□□□ 0.14
SOX2-201ENST00000325404 FAM162BQ5T6X4 162 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 C5orf17Q8NAS9 161 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 BORCS7Q96B45 105 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 FMC1Q96HJ9 113 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 PRSS22Q9GZN4 317 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 NGBQ9NPG2 151 aa15.92■□□□□ 0.14
SOX2-201ENST00000325404 ICE1Q9Y2F5 2266 aa15.91■□□□□ 0.14
SOX2-201ENST00000325404 SLC25A5P05141 298 aaKnown RBP15.91■□□□□ 0.14
SOX2-201ENST00000325404 NBEAP1P0C6P0 100 aa15.91■□□□□ 0.14
SOX2-201ENST00000325404 GAGE1Q13065 139 aa15.91■□□□□ 0.14
SOX2-201ENST00000325404 GDF5OSQ5U4N7 250 aa15.91■□□□□ 0.14
SOX2-201ENST00000325404 TPSG1Q9NRR2 321 aa15.91■□□□□ 0.14
SOX2-201ENST00000325404 RITA1Q96K30 269 aa15.91■□□□□ 0.14
SOX2-201ENST00000325404 ALKBH7Q9BT30 221 aaPredicted RBP15.91■□□□□ 0.14
SOX2-201ENST00000325404 UQCR10Q9UDW1 63 aa15.91■□□□□ 0.14
SOX2-201ENST00000325404 PGPA6NDG6 321 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 PMCHL1Q16048 86 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 C8orf46Q8TAG6 207 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 ATRXP46100 2492 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 HIGD1CA8MV81 97 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 GP9P14770 177 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 ORM2P19652 201 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 SPATA45Q537H7 98 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 ZNF841Q6ZN19 808 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 KLHDC1Q8N7A1 406 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 OR1B1Q8NGR6 318 aa15.9■□□□□ 0.14
SOX2-201ENST00000325404 LTAP01374 205 aa15.89■□□□□ 0.13
SOX2-201ENST00000325404 SFTPCP11686 197 aa15.89■□□□□ 0.13
SOX2-201ENST00000325404 MMDQ15546 238 aa15.89■□□□□ 0.13
SOX2-201ENST00000325404 GFRA4Q9GZZ7 299 aa15.89■□□□□ 0.13
SOX2-201ENST00000325404 FAM231BA6NCW3 169 aa15.89■□□□□ 0.13
SOX2-201ENST00000325404 CCL21O00585 134 aa15.89■□□□□ 0.13
SOX2-201ENST00000325404 IGHV3-48P01763 117 aa15.89■□□□□ 0.13
SOX2-201ENST00000325404 GNG5P63218 68 aa15.89■□□□□ 0.13
SOX2-201ENST00000325404 RPP21Q9H633 154 aaKnown RBP15.89■□□□□ 0.13
SOX2-201ENST00000325404 PPP1R14DQ9NXH3 145 aa15.89■□□□□ 0.13
SOX2-201ENST00000325404 SIGLEC9Q9Y336 463 aa15.89■□□□□ 0.13
SOX2-201ENST00000325404 A8MWL6 223 aa15.88■□□□□ 0.13
SOX2-201ENST00000325404 ENSAO43768 121 aaKnown RBP15.88■□□□□ 0.13
SOX2-201ENST00000325404 IGLV1-47P01700 117 aa15.88■□□□□ 0.13
SOX2-201ENST00000325404 C20orf202A1L168 122 aa15.88■□□□□ 0.13
SOX2-201ENST00000325404 C19orf71A6NCJ1 209 aa15.88■□□□□ 0.13
SOX2-201ENST00000325404 MOSP00540 346 aa15.88■□□□□ 0.13
SOX2-201ENST00000325404 IGLC2P0DOY2 106 aa15.88■□□□□ 0.13
SOX2-201ENST00000325404 IGLC3P0DOY3 106 aa15.88■□□□□ 0.13
SOX2-201ENST00000325404 DYNLRB1Q9NP97 96 aa15.88■□□□□ 0.13
SOX2-201ENST00000325404 TMEM14CQ9P0S9 112 aa15.88■□□□□ 0.13
SOX2-201ENST00000325404 F11RQ9Y624 299 aaKnown RBP15.88■□□□□ 0.13
SOX2-201ENST00000325404 ZZEF1O43149 2961 aa15.87■□□□□ 0.13
SOX2-201ENST00000325404 SHISA9B4DS77 424 aa15.87■□□□□ 0.13
SOX2-201ENST00000325404 RBP4P02753 201 aa15.87■□□□□ 0.13
SOX2-201ENST00000325404 ZNF25P17030 456 aaPredicted RBP15.87■□□□□ 0.13
SOX2-201ENST00000325404 HCP5Q6MZN7 132 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms