RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 OR13A1Q8NGR1 328 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 TFF2Q03403 129 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 UBE2V1Q13404 147 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 C2orf82Q6UX34 121 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 JPT2Q9H910 190 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 GTSF1LQ9H1H1 148 aa14.11□□□□□ -0.15
SMCHD1-201ENST00000320876 TRAV1-1A0A0B4J248 108 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 DLEU1O43261 78 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 OCIAD2Q56VL3 154 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 FGF16O43320 207 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 BSPH1Q075Z2 132 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 EFEMP2O95967 443 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 IGLV3-21P80748 117 aaPredicted RBP14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 OCC1Q8TAD7 63 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 C8orf46Q8TAG6 207 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 PATE3B3GLJ2 98 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 LEPROTO15243 131 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 GFI1BQ5VTD9 330 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 COX11Q9Y6N1 276 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 GUSBP1Q15486 140 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 BCL6BQ8N143 479 aaPredicted RBP14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 VGLL1Q99990 258 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 REPIN1Q9BWE0 567 aaKnown RBP14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 FREM1Q5H8C1 2179 aa14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 ZNF48Q96MX3 618 aaPredicted RBP14.1□□□□□ -0.15
SMCHD1-201ENST00000320876 LAMTOR3Q9UHA4 124 aa14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 GATD1Q8NB37 220 aa14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 GTF3AQ92664 365 aaKnown RBP14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 IGHV3-64A0A075B6Q5 118 aa14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 GATA2P23769 480 aaPredicted RBP14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 KLF17Q5JT82 389 aaPredicted RBP14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 DNAJC30Q96LL9 226 aa14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 UMODP07911 640 aa14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 PRTN3P24158 256 aa14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 ADARB2-AS1A8MUL3 147 aa14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 SPINK8P0C7L1 97 aa14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 LINC00158P58513 81 aa14.09□□□□□ -0.15
SMCHD1-201ENST00000320876 PCOLCEQ15113 449 aa14.08□□□□□ -0.15
SMCHD1-201ENST00000320876 LINC00271P0C7V0 271 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 SIGLEC15Q6ZMC9 328 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 PLEKHB2Q96CS7 222 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 CHCHD2Q9Y6H1 151 aaPredicted RBP14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 IQCF6A8MYZ5 107 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 DUSP14O95147 198 aaKnown RBP14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 MAJINQ3KP22 176 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 A0A0G2JMM0 328 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 A0A1W2PPB8 328 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 KIR3DP1A8MWS1 328 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 UPK2O00526 184 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 CDCP2Q5VXM1 449 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 NEU4Q8WWR8 484 aaPredicted RBP14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 RHOGP84095 191 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 LY6G6FQ5SQ64 297 aa14.08□□□□□ -0.16
SMCHD1-201ENST00000320876 CECR9P0C854 216 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 ZXDCQ2QGD7 858 aaPredicted RBP14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 IGHV2OR16-5A0A0B4J2B6 119 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 SHISA3A0PJX4 238 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 D6R8Y8 96 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 CD55P08174 381 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 OR10W1Q8NGF6 305 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 MED12LQ86YW9 2145 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 COLCA2A8K830 154 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 VWC2LB2RUY7 222 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 LHFPL4Q7Z7J7 247 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 RPRMLQ8N4K4 120 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 CD300EQ496F6 205 aaPredicted RBP14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 SLC25A45Q8N413 288 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 PSG8Q9UQ74 426 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 KIR3DS1Q14943 382 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 AGMATQ9BSE5 352 aa14.07□□□□□ -0.16
SMCHD1-201ENST00000320876 ASCL4Q6XD76 172 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 DEPPQ9NTK1 212 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 SPANXDQ9BXN6 97 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 IGHV3OR16-10A0A075B7F0 116 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 KLF12Q9Y4X4 402 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 PRR32B1ATL7 298 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 SLC25A39Q9BZJ4 359 aaPredicted RBP14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 EML5Q05BV3 1969 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 PRCDQ00LT1 54 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 MORN2Q502X0 79 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 GLMPQ8WWB7 406 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 CXCL1P09341 107 aa14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 SRSF7Q16629 238 aaKnown RBP eCLIP14.06□□□□□ -0.16
SMCHD1-201ENST00000320876 ABHD17AQ96GS6 310 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 USF3Q68DE3 2245 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 PYYP10082 97 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 GTSCR1Q86UQ5 136 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 FAM168AQ92567 244 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 KIAA1549Q9HCM3 1950 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 STPG1Q5TH74 334 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 A0A087X0K7 114 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 IGHV3OR16-8A0A075B7F1 116 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 TRGV4A0A0C4DH28 118 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 VDAC2P45880 294 aaPredicted RBP14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 TNCP24821 2201 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 FBLN5Q9UBX5 448 aa14.05□□□□□ -0.16
SMCHD1-201ENST00000320876 CRIM1Q9NZV1 1036 aa14.04□□□□□ -0.16
SMCHD1-201ENST00000320876 OVOL1O14753 267 aa14.04□□□□□ -0.16
SMCHD1-201ENST00000320876 TEX43Q6ZNM6 134 aa14.04□□□□□ -0.16
SMCHD1-201ENST00000320876 SAP25Q8TEE9 199 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms