RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 CCSO14618 274 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 GNG7O60262 68 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 HNRNPCP07910 306 aaKnown RBP eCLIP2.53□□□□□ -2
SCAMP1-201ENST00000320280 DLX1P56177 255 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 TAS2R45P59539 299 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 S100A10P60903 97 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 C15orf32Q32M92 178 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 ACOT6Q3I5F7 207 aaPredicted RBP2.53□□□□□ -2
SCAMP1-201ENST00000320280 KRTAP24-1Q3LI83 254 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 ZFP69Q49AA0 526 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 C9orf152Q5JTZ5 239 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 SLC25A24Q6NUK1 477 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 VSIRQ9H7M9 311 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 ZC4H2Q9NQZ6 224 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 PRR13Q9NZ81 148 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 DMRT1Q9Y5R6 373 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 TRAV1-1A0A0B4J248 108 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 CYSRT1A8MQ03 144 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 G3V3Q6 166 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 PF4V1P10720 104 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 AREGP15514 252 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 ATF4P18848 351 aaPredicted RBP2.53□□□□□ -2
SCAMP1-201ENST00000320280 CRYBB3P26998 211 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 OR10J1P30954 320 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 ARL3P36405 182 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 RAB2AP61019 212 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 HNF4GQ14541 408 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 KPRPQ5T749 579 aaPredicted RBP2.53□□□□□ -2
SCAMP1-201ENST00000320280 ACSM6Q6P461 480 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 VKORC1L1Q8N0U8 176 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 OR1N2Q8NGR9 330 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 SCARB1Q8WTV0 552 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 DPF1Q92782 380 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 METTL26Q96S19 204 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 SMDT1Q9H4I9 107 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 DAZ1Q9NQZ3 744 aaKnown RBP2.53□□□□□ -2
SCAMP1-201ENST00000320280 GSKIPQ9P0R6 139 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 FASNP49327 2511 aaKnown RBP2.53□□□□□ -2
SCAMP1-201ENST00000320280 CUBNO60494 3623 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 ADGRG4Q8IZF6 3080 aa2.53□□□□□ -2
SCAMP1-201ENST00000320280 IGSF23A1L1A6 192 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 A8MZ25 164 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 SCGB1D2O95969 90 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 HBE1P02100 147 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 OR5G3P0C626 314 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 CXCL3P19876 107 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 FHITP49789 147 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 PJVKQ0ZLH3 352 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 GAMTQ14353 236 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 RNF151Q2KHN1 245 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 KHDC3LQ587J8 217 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 SPANXN5Q5MJ07 72 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 LAMTOR1Q6IAA8 161 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 PRIMA1Q86XR5 153 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 LINC00482Q8N8I6 264 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 TMEM170AQ8WVE7 144 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 TAF15Q92804 592 aaKnown RBP eCLIP2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 SAT2Q96F10 170 aaPredicted RBP2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 CCDC140Q96MF4 163 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 SLC50A1Q9BRV3 221 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 MFFQ9GZY8 342 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 C11orf21Q9P2W6 132 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 RABAC1Q9UI14 185 aa2.53□□□□□ -2.01
SCAMP1-201ENST00000320280 MEX3AA1L020 520 aaKnown RBP2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 H0YIZ8 118 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 H3BRN7 92 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 CAV2P51636 162 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 MFAP2P55001 183 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 AKR1C1Q04828 323 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 RPEL1Q2QD12 228 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 Q56UQ5 140 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 LCN12Q6JVE5 192 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 PQLC2Q6ZP29 291 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 Q6ZRG5 221 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 WWC2-AS2Q96NR7 200 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 ODF3Q96PU9 254 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 TNFRSF19Q9NS68 423 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 OR5AC2Q9NZP5 309 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 PXMP4Q9Y6I8 212 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 HIVEP2P31629 2446 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 TRBV6-1A0A0K0K1D8 114 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 ZNF785A8K8V0 405 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 E7EUB6 86 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 CCL24O00175 119 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 AMBPP02760 352 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 S100A9P06702 114 aaKnown RBP2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 CTSGP08311 255 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 SPP1P10451 314 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 IAPPP10997 89 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 RPL7P18124 248 aaKnown RBP2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 LINC00205P59089 165 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 RHOBP62745 196 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 C3orf56Q8N813 242 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 OR10W1Q8NGF6 305 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 OR5C1Q8NGR4 320 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 SPAG8Q99932 426 aaPredicted RBP2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 GGTLC1Q9BX51 225 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 NPCDR1Q9BY65 106 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 TMEM167BQ9NRX6 74 aa2.52□□□□□ -2.01
SCAMP1-201ENST00000320280 PPP1R14DQ9NXH3 145 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms