RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 E7EQL1 145 aa12.58□□□□□ -0.4
SHROOM1-201ENST00000319854 CLEC5AQ9NY25 188 aa12.58□□□□□ -0.4
SHROOM1-201ENST00000319854 C2orf70A6NJV1 201 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 OR10J4P0C629 311 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 MGST1P10620 155 aaKnown RBP12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 USF1P22415 310 aaPredicted RBP12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 RHOBP62745 196 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 PMCHL1Q16048 86 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 NUP37Q8NFH4 326 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 SH2D7A6NKC9 451 aaPredicted RBP12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 E7EUB6 86 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 NDUFB3O43676 98 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 RPL8P62917 257 aaKnown RBP12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 PSG5Q15238 335 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 SLC25A48Q6ZT89 311 aaKnown RBP12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 PNKDQ8N490 385 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 IGFBPL1Q8WX77 278 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 RNASE6Q93091 150 aaKnown RBP12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 NCOR1P1Q9H4R4 102 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 CTSZQ9UBR2 303 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 SMIM27A0A1W2PRY6 76 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 TMEM178BH3BS89 294 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 M0R2Z0 102 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 HLA-DQA1P01909 254 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 RHOGP84095 191 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 TEPPQ6URK8 271 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 OR8B3Q8NGG8 313 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 OR8B2Q96RD0 313 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 NPVFQ9HCQ7 196 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 OSTCQ9NRP0 149 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 TMEM14BQ9NUH8 114 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 RPH3ALQ9UNE2 315 aa12.57□□□□□ -0.4
SHROOM1-201ENST00000319854 HIVEP3Q5T1R4 2406 aa12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 KIR2DS2P43631 304 aa12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 LHFPL4Q7Z7J7 247 aa12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 ZNF503Q96F45 646 aa12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 LINC00479Q96M42 142 aa12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 HSBP1O75506 76 aa12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 CA7P43166 264 aa12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 IBA57Q5T440 356 aaKnown RBP12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 SSBP4Q9BWG4 385 aaPredicted RBP12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 RAB9BQ9NP90 201 aa12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 RAXQ9Y2V3 346 aa12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 LINC00312Q9Y6C7 94 aa12.56□□□□□ -0.4
SHROOM1-201ENST00000319854 AMMECR1LQ6DCA0 310 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 WASHC3Q9Y3C0 194 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 IGHV3-21A0A0B4J1V1 117 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 TEX50A0A1B0GTY4 177 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 GGTLC3B5MD39 225 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 NUDT3O95989 172 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 TMPRSS3P57727 454 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 LRRC10Q5BKY1 277 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 LINC00173Q6ZV60 143 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 NUDT10Q8NFP7 164 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 OR9G1Q8NH87 305 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 RITA1Q96K30 269 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 COMMD5Q9GZQ3 224 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 TNFRSF19Q9NS68 423 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 AREGP15514 252 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 TEX36Q5VZQ5 186 aa12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 RNASEKQ6P5S7 137 aaKnown RBP12.55□□□□□ -0.4
SHROOM1-201ENST00000319854 hDV102S1A0JD36 115 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 ISLRO14498 428 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 LINC00869P0C866 280 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 UBE2G1P62253 170 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 TIGITQ495A1 244 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 OR2T6Q8NHC8 308 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 ZNF596Q8TC21 504 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 URB1-AS1Q96HZ7 61 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 TPSG1Q9NRR2 321 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 MRPL27Q9P0M9 148 aaKnown RBP12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 FOXA2Q9Y261 457 aaPredicted RBP12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 MUC21A0A0G2JKD1 596 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 MUC21A0A140T8X8 626 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 SHISA9B4DS77 424 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 APOA2P02652 100 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 C3orf36Q3SXR2 165 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 MUC21Q5SSG8 566 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 OR52E5Q8NH55 327 aa12.54□□□□□ -0.4
SHROOM1-201ENST00000319854 IGKV1OR2-108A0A075B7D4 117 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 K7ENP7 123 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 UPK2O00526 184 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 SLC25A17O43808 307 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 CD24P25063 80 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 ADTRPQ96IZ2 230 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 CSTL1Q9H114 145 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 ZNF331Q9NQX6 463 aaPredicted RBP12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 SELENOKQ9Y6D0 94 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 IZUMO1RA6ND01 250 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 VSTM5A8MXK1 200 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 COX7A1P24310 79 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 RPL19P84098 196 aaKnown RBP12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 FOXE3Q13461 319 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 FLYWCH2Q96CP2 140 aaKnown RBP12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 OR7C2O60412 319 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 MT-CO2P00403 227 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 CDSNQ15517 529 aa12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 MCRIP2Q9BUT9 160 aaKnown RBP12.53□□□□□ -0.4
SHROOM1-201ENST00000319854 PRNDQ9UKY0 176 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms