RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 TSKUQ8WUA8 353 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 PERPQ96FX8 193 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 BET1LQ9NYM9 111 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 TANC2Q9HCD6 1990 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 PPIAL4EA0A075B759 164 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 PPIAL4DF5H284 164 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 PPIAL4FP0DN26 164 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 COL8A1P27658 744 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 CFHR2P36980 270 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 PRRX1P54821 245 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 SSBP2P81877 361 aaPredicted RBP8.54□□□□□ -1.04
COL3A1-202ENST00000317840 NUP35Q8NFH5 326 aa8.54□□□□□ -1.04
COL3A1-202ENST00000317840 LY6HO94772 140 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 RBP4P02753 201 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 TMEM177Q53S58 311 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 ZNF503Q96F45 646 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 LINC00312Q9Y6C7 94 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 CNIH1O95406 144 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 NBEAP1P0C6P0 100 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 VAMP3Q15836 100 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 MAJINQ3KP22 176 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 ZNF788Q6ZQV5 615 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 CLEC7AQ9BXN2 247 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 CLEC5AQ9NY25 188 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 RNF114Q9Y508 228 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 MBD3L4A6NDZ8 208 aaPredicted RBP8.53□□□□□ -1.04
COL3A1-202ENST00000317840 MBD3L3A6NE82 208 aaPredicted RBP8.53□□□□□ -1.04
COL3A1-202ENST00000317840 MBD3L5A6NJ08 208 aaPredicted RBP8.53□□□□□ -1.04
COL3A1-202ENST00000317840 M0QZ24 198 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 ATP5IP56385 69 aaPredicted RBP8.53□□□□□ -1.04
COL3A1-202ENST00000317840 NHLH1Q02575 133 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 MBD3L2Q8NHZ7 208 aaPredicted RBP8.53□□□□□ -1.04
COL3A1-202ENST00000317840 C18orf32Q8TCD1 76 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 ONECUT1Q9UBC0 465 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 WASHC3Q9Y3C0 194 aa8.53□□□□□ -1.04
COL3A1-202ENST00000317840 HYPMO75409 117 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 CD24P25063 80 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 DIAPH2-AS1Q14236 149 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 GRAMD2BQ96HH9 432 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 A8MWL6 223 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 CORTO00230 105 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 ITGB1BP1O14713 200 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 SEM1Q6ZVN7 128 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 STXBP6Q8NFX7 210 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 CBY1Q9Y3M2 126 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 TCRBV4S1A1TA0A5B7 111 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 E7EUB6 86 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 H0YJW9 148 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 WT1-ASQ06250 92 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 ETFRF1Q6IPR1 90 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 ERASQ7Z444 233 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 SLC25A2Q9BXI2 301 aa8.52□□□□□ -1.05
COL3A1-202ENST00000317840 FNDC10F2Z333 226 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 LHBP01229 141 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 BTF3P20290 206 aaKnown RBP8.51□□□□□ -1.05
COL3A1-202ENST00000317840 HTR1DP28221 377 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 PRNTQ86SH4 94 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 GSX1Q9H4S2 264 aaPredicted RBP8.51□□□□□ -1.05
COL3A1-202ENST00000317840 FNDC4Q9H6D8 234 aaPredicted RBP8.51□□□□□ -1.05
COL3A1-202ENST00000317840 CCDC168Q8NDH2 2452 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.51□□□□□ -1.05
COL3A1-202ENST00000317840 RPL27AP46776 148 aaKnown RBP8.51□□□□□ -1.05
COL3A1-202ENST00000317840 GUSBP1Q15486 140 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 UBTD1Q9HAC8 227 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 EPDR1Q9UM22 224 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 SMIM27A0A1W2PRY6 76 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 SH2D7A6NKC9 451 aaPredicted RBP8.51□□□□□ -1.05
COL3A1-202ENST00000317840 CGB3P0DN86 165 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 CGB7P0DN87 165 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 IGLC2P0DOY2 106 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 IGLC3P0DOY3 106 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 DLX1P56177 255 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 POU2AF1Q16633 256 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 CR1LQ2VPA4 569 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 TMEM200BQ69YZ2 307 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 GPR82Q96P67 336 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 NDUFA4L2Q9NRX3 87 aa8.51□□□□□ -1.05
COL3A1-202ENST00000317840 LEPROTL1O95214 131 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 HBBP68871 147 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 RNF151Q2KHN1 245 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 ASPMQ8IZT6 3477 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 TRAV8-1A0A0A6YYK1 113 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 CA7P43166 264 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 UNQ5815/PRO19632Q6UWF5 114 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 C22orf34Q6ZV56 151 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 Q6ZVH6 145 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 SSX8Q7RTT4 187 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 STPG4Q8N801 248 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 TMEM186Q96B77 213 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 INSIG2Q9Y5U4 225 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 C17orf100A8MU93 164 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 ESDP10768 282 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 UCNP55089 124 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 ZNF329Q86UD4 541 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 TMEM70Q9BUB7 260 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 TPSG1Q9NRR2 321 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 DYSFO75923 2080 aa8.5□□□□□ -1.05
COL3A1-202ENST00000317840 IGLV3-9A0A075B6K5 115 aa8.49□□□□□ -1.05
COL3A1-202ENST00000317840 FAM181BA6NEQ2 426 aa8.49□□□□□ -1.05
COL3A1-202ENST00000317840 K7ENP7 123 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms