RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 STXBP6Q8NFX7 210 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 TNFRSF19Q9NS68 423 aa11.32□□□□□ -0.6
VRK3-201ENST00000316763 IGKV1D-37A0A075B6S9 117 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 NDUFS8O00217 210 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 ISLRO14498 428 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 CRYGCP07315 174 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 CRYGBP07316 175 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 RD3LP0DJH9 198 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 ADMP35318 185 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 COMPP49747 757 aaPredicted RBP11.31□□□□□ -0.6
VRK3-201ENST00000316763 COX19Q49B96 90 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 OR1L6Q8NGR2 347 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 C10orf105Q8TEF2 133 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 FAM168AQ92567 244 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 RPEQ96AT9 228 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 TRGV9Q99603 122 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 SIGLEC9Q9Y336 463 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 VWC2LB2RUY7 222 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 GZMBP10144 247 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 ZFP36P26651 326 aaKnown RBP11.31□□□□□ -0.6
VRK3-201ENST00000316763 MORN5Q5VZ52 161 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 HCP5Q6MZN7 132 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 CLEC2AQ6UVW9 174 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 PATE2Q6UY27 113 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 RNF5Q99942 180 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 CDC42EP3Q9UKI2 254 aa11.31□□□□□ -0.6
VRK3-201ENST00000316763 M0R1W7 72 aa11.3□□□□□ -0.6
VRK3-201ENST00000316763 IGHV3-48P01763 117 aa11.3□□□□□ -0.6
VRK3-201ENST00000316763 MGST1P10620 155 aaKnown RBP11.3□□□□□ -0.6
VRK3-201ENST00000316763 PAX2Q02962 417 aa11.3□□□□□ -0.6
VRK3-201ENST00000316763 IGF2BP2-AS1Q96M15 143 aa11.3□□□□□ -0.6
VRK3-201ENST00000316763 PIMREGQ9BSJ6 248 aa11.3□□□□□ -0.6
VRK3-201ENST00000316763 MRPL18Q9H0U6 180 aaKnown RBP11.3□□□□□ -0.6
VRK3-201ENST00000316763 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
VRK3-201ENST00000316763 CSMD1Q96PZ7 3565 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 NAV3Q8IVL0 2385 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 FCN1O00602 326 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 CBLN1P23435 193 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 COX7A1P24310 79 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 DEFA6Q01524 100 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 C9orf152Q5JTZ5 239 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 WDR73Q6P4I2 378 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 C1orf122Q6ZSJ8 110 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 LINC00305Q7Z4B0 112 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 PPP1R27Q86WC6 154 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 OR8I2Q8N0Y5 310 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 TMEM116Q8NCL8 245 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 ONECUT1Q9UBC0 465 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 IGHV4-30-2A0A087WSY4 118 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 GATCO43716 136 aaKnown RBP11.29□□□□□ -0.6
VRK3-201ENST00000316763 MT-ND6P03923 174 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 PYYP10082 97 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 CNTFRP26992 372 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 IER3P46695 156 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 DSCR9P59020 149 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 FAM209BQ5JX69 171 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 IBA57Q5T440 356 aaKnown RBP11.29□□□□□ -0.6
VRK3-201ENST00000316763 ZNF329Q86UD4 541 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 KRTAP1-3Q8IUG1 177 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 KIR3DL3Q8N743 410 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 GNB1LQ9BYB4 327 aa11.29□□□□□ -0.6
VRK3-201ENST00000316763 RNASE7Q9H1E1 156 aaKnown RBP11.29□□□□□ -0.6
VRK3-201ENST00000316763 MRPL36Q9P0J6 103 aaKnown RBP11.29□□□□□ -0.6
VRK3-201ENST00000316763 PEX7O00628 323 aa11.28□□□□□ -0.6
VRK3-201ENST00000316763 IGLV2-8P01709 118 aa11.28□□□□□ -0.6
VRK3-201ENST00000316763 CRISP2P16562 243 aa11.28□□□□□ -0.6
VRK3-201ENST00000316763 ORM2P19652 201 aa11.28□□□□□ -0.6
VRK3-201ENST00000316763 CX3CL1P78423 397 aa11.28□□□□□ -0.6
VRK3-201ENST00000316763 Q5PR19 223 aa11.28□□□□□ -0.6
VRK3-201ENST00000316763 OR1B1Q8NGR6 318 aa11.28□□□□□ -0.6
VRK3-201ENST00000316763 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
VRK3-201ENST00000316763 POLR3KQ9Y2Y1 108 aaPredicted RBP11.28□□□□□ -0.6
VRK3-201ENST00000316763 F11RQ9Y624 299 aaKnown RBP11.28□□□□□ -0.6
VRK3-201ENST00000316763 MAP1AP78559 2803 aaPredicted RBP11.28□□□□□ -0.6
VRK3-201ENST00000316763 PLXNB1O43157 2135 aa11.27□□□□□ -0.6
VRK3-201ENST00000316763 ZNF705GA8MUZ8 300 aaPredicted RBP11.27□□□□□ -0.6
VRK3-201ENST00000316763 SNURFLB1AK76 121 aa11.27□□□□□ -0.6
VRK3-201ENST00000316763 HYPMO75409 117 aa11.27□□□□□ -0.6
VRK3-201ENST00000316763 DLX1P56177 255 aa11.27□□□□□ -0.6
VRK3-201ENST00000316763 ARF6P62330 175 aa11.27□□□□□ -0.6
VRK3-201ENST00000316763 PLGLAQ15195 96 aa11.27□□□□□ -0.6
VRK3-201ENST00000316763 PRSS57Q6UWY2 283 aa11.27□□□□□ -0.6
VRK3-201ENST00000316763 FOXC2Q99958 501 aa11.27□□□□□ -0.6
VRK3-201ENST00000316763 SERTAD4Q9NUC0 356 aa11.27□□□□□ -0.6
VRK3-201ENST00000316763 VPS13CQ709C8 3753 aa11.27□□□□□ -0.61
VRK3-201ENST00000316763 MOSP00540 346 aa11.27□□□□□ -0.61
VRK3-201ENST00000316763 PRTN3P24158 256 aa11.27□□□□□ -0.61
VRK3-201ENST00000316763 MFAP2P55001 183 aa11.27□□□□□ -0.61
VRK3-201ENST00000316763 IQCJQ1A5X6 159 aa11.27□□□□□ -0.61
VRK3-201ENST00000316763 CMTM2Q8TAZ6 248 aa11.27□□□□□ -0.61
VRK3-201ENST00000316763 SRSF8Q9BRL6 282 aaKnown RBP11.27□□□□□ -0.61
VRK3-201ENST00000316763 CCDC168Q8NDH2 2452 aa11.26□□□□□ -0.61
VRK3-201ENST00000316763 IGHV4-61A0A0C4DH41 118 aa11.26□□□□□ -0.61
VRK3-201ENST00000316763 IGHV2-70DA0A0C4DH43 119 aa11.26□□□□□ -0.61
VRK3-201ENST00000316763 LY6LH3BQJ8 138 aa11.26□□□□□ -0.61
VRK3-201ENST00000316763 PAFAH1B2P68402 229 aa11.26□□□□□ -0.61
VRK3-201ENST00000316763 FXYD3Q14802 87 aa11.26□□□□□ -0.61
VRK3-201ENST00000316763 BAGE2Q86Y30 109 aa11.26□□□□□ -0.61
VRK3-201ENST00000316763 TMEM256Q8N2U0 113 aa11.26□□□□□ -0.61
VRK3-201ENST00000316763 OR11H6Q8NGC7 330 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms