RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 OR9G1Q8NH87 305 aa13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 WIPF2Q8TF74 440 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 HRNRQ86YZ3 2850 aaPredicted RBP13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 A0A1W2PN81 502 aa13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 J3QR06 171 aa13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 CD3EP07766 207 aa13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 UBE2L3P68036 154 aaKnown RBP13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 MORN5Q5VZ52 161 aa13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 SLC25A33Q9BSK2 321 aa13.88□□□□□ -0.19
SCAMP4-201ENST00000316097 FNDC10F2Z333 226 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 SAA2P0DJI9 122 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 RASL11AQ6T310 242 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 RTL8BQ17RB0 113 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 ETFRF1Q6IPR1 90 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 MBD6Q96DN6 1003 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 DYNLRB1Q9NP97 96 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 IGSF10Q6WRI0 2623 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 LYNX1G3V0Z9 82 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 F2RL2O00254 374 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 MGST3O14880 152 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 LYNX1P0DP58 116 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 KLF5Q13887 457 aaPredicted RBP13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 CALYQ9NYX4 217 aa13.87□□□□□ -0.19
SCAMP4-201ENST00000316097 SH2D7A6NKC9 451 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-201ENST00000316097 CT45A1Q5HYN5 189 aa13.86□□□□□ -0.19
SCAMP4-201ENST00000316097 NUDT10Q8NFP7 164 aa13.86□□□□□ -0.19
SCAMP4-201ENST00000316097 CT45A3Q8NHU0 189 aa13.86□□□□□ -0.19
SCAMP4-201ENST00000316097 NUDT11Q96G61 164 aa13.86□□□□□ -0.19
SCAMP4-201ENST00000316097 GAFA1Q96PS6 74 aa13.86□□□□□ -0.19
SCAMP4-201ENST00000316097 AMMECR1Q9Y4X0 333 aaPredicted RBP13.86□□□□□ -0.19
SCAMP4-201ENST00000316097 TNCP24821 2201 aa13.86□□□□□ -0.19
SCAMP4-201ENST00000316097 FAM222BQ8WU58 562 aa13.86□□□□□ -0.19
SCAMP4-201ENST00000316097 GRAMD2BQ96HH9 432 aa13.86□□□□□ -0.19
SCAMP4-201ENST00000316097 TNFRSF1AP19438 455 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 GNLYP22749 145 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 MPV17L2Q567V2 206 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 TMEM70Q9BUB7 260 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 SLC25A2Q9BXI2 301 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 RNF24Q9Y225 148 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 OR4C46A6NHA9 309 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 HIGD1CA8MV81 97 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 M0QZ24 198 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 PYYP10082 97 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 FBXL19-AS1Q494R0 122 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 PPP1R35Q8TAP8 253 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 ZNF596Q8TC21 504 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 FAM167A-AS1Q96KT0 104 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 C19orf24Q9BVV8 132 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 TACC2O95359 2948 aa13.85□□□□□ -0.19
SCAMP4-201ENST00000316097 RAI1Q7Z5J4 1906 aaPredicted RBP13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 TRAV30A0A087WSZ9 112 aa13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 CORTO00230 105 aa13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 APOBEC3AP31941 199 aaPredicted RBP13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 PRCDQ00LT1 54 aa13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 PRNDQ9UKY0 176 aa13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 CACNA1BQ00975 2339 aa13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 ARFGEF3Q5TH69 2177 aa13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 FCN3O75636 299 aa13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 FAM231DQ6ZW35 169 aa13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 OR2T6Q8NHC8 308 aa13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 URB1-AS1Q96HZ7 61 aa13.84□□□□□ -0.19
SCAMP4-201ENST00000316097 OR2J3O76001 311 aa13.83□□□□□ -0.2
SCAMP4-201ENST00000316097 LY6HO94772 140 aa13.83□□□□□ -0.2
SCAMP4-201ENST00000316097 CR1LQ2VPA4 569 aa13.83□□□□□ -0.2
SCAMP4-201ENST00000316097 LYPD2Q6UXB3 125 aa13.83□□□□□ -0.2
SCAMP4-201ENST00000316097 WASHC3Q9Y3C0 194 aa13.83□□□□□ -0.2
SCAMP4-201ENST00000316097 VSTM5A8MXK1 200 aa13.83□□□□□ -0.2
SCAMP4-201ENST00000316097 LRRC10Q5BKY1 277 aa13.83□□□□□ -0.2
SCAMP4-201ENST00000316097 ZNF788Q6ZQV5 615 aa13.83□□□□□ -0.2
SCAMP4-201ENST00000316097 ZFYVE26Q68DK2 2539 aa13.83□□□□□ -0.2
SCAMP4-201ENST00000316097 ASH1LQ9NR48 2969 aaKnown RBP13.83□□□□□ -0.2
SCAMP4-201ENST00000316097 hDV102S1A0JD36 115 aa13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 VWC2LB2RUY7 222 aa13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 PEX7O00628 323 aa13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 C17orf58Q2M2W7 97 aa13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 MRPL32Q9BYC8 188 aaKnown RBP13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 SPTAN1Q13813 2472 aaKnown RBP13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 TMEM178BH3BS89 294 aa13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 CD24P25063 80 aa13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 FOXA3P55318 350 aaPredicted RBP13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 OR10W1Q8NGF6 305 aa13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 SGK494Q96LW2 274 aa13.82□□□□□ -0.2
SCAMP4-201ENST00000316097 TEX50A0A1B0GTY4 177 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 UPK2O00526 184 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 NUDT3O95989 172 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 IGKV1-16P04430 117 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 FAM120AOSQ5T036 256 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 LINC00173Q6ZV60 143 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 SSX8Q7RTT4 187 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 ZNF329Q86UD4 541 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 TAX1BP3O14907 124 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 RNASE2P10153 161 aaKnown RBP13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 GNG5P63218 68 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 CD69Q07108 199 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 C2orf83Q53S99 150 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 ZNRD1Q9P1U0 126 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 ZNF257Q9Y2Q1 563 aa13.81□□□□□ -0.2
SCAMP4-201ENST00000316097 PPIAL4EA0A075B759 164 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 PSMB11A5LHX3 300 aa13.8□□□□□ -0.2
SCAMP4-201ENST00000316097 SRRM4A7MD48 611 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms