RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 HAGHQ16775 308 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 LEMD1Q68G75 181 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 TMEM14EPQ6UXP3 125 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 MARC2Q969Z3 335 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 SMIM8Q96KF7 97 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 C2orf50Q96LR7 162 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 NPPCP23582 126 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 CRYBB3P26998 211 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 RAB11AP62491 216 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 LINC00322Q6ZN03 302 aaPredicted RBP8.95□□□□□ -0.98
SCFD1-201ENST00000311943 TMEM217Q8N7C4 229 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 OR1S2Q8NGQ3 325 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 Q8WTZ3 238 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 SLC35E1Q96K37 410 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 TUBA4BQ9H853 241 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 OR5AC2Q9NZP5 309 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 DOK5Q9P104 306 aa8.95□□□□□ -0.98
SCFD1-201ENST00000311943 ZMAT5Q9UDW3 170 aaKnown RBP8.95□□□□□ -0.98
SCFD1-201ENST00000311943 AGRNO00468 2067 aa8.94□□□□□ -0.98
SCFD1-201ENST00000311943 STAB2Q8WWQ8 2551 aa8.94□□□□□ -0.98
SCFD1-201ENST00000311943 IGSF23A1L1A6 192 aa8.94□□□□□ -0.98
SCFD1-201ENST00000311943 TOMM40O96008 361 aa8.94□□□□□ -0.98
SCFD1-201ENST00000311943 P2RY1P47900 373 aa8.94□□□□□ -0.98
SCFD1-201ENST00000311943 YPEL3P61236 119 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-201ENST00000311943 LYZP61626 148 aa8.94□□□□□ -0.98
SCFD1-201ENST00000311943 OR2K2Q8NGT1 345 aa8.94□□□□□ -0.98
SCFD1-201ENST00000311943 CIB3Q96Q77 187 aaPredicted RBP8.94□□□□□ -0.98
SCFD1-201ENST00000311943 MS4A6AQ9H2W1 248 aa8.94□□□□□ -0.98
SCFD1-201ENST00000311943 U3KQE9 123 aa8.94□□□□□ -0.98
SCFD1-201ENST00000311943 SNRPCP09234 159 aaKnown RBP8.93□□□□□ -0.98
SCFD1-201ENST00000311943 CXCL3P19876 107 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 GPX4P36969 197 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-201ENST00000311943 CAV2P51636 162 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 AKR1C1Q04828 323 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 SLC38A11Q08AI6 406 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 ETFRF1Q6IPR1 90 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 RNF125Q96EQ8 232 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 TRAV30A0A087WSZ9 112 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 RPL35AP18077 110 aaKnown RBP8.93□□□□□ -0.98
SCFD1-201ENST00000311943 BCAP31P51572 246 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 STXBP6Q8NFX7 210 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 METTL26Q96S19 204 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 SPAG8Q99932 426 aaPredicted RBP8.93□□□□□ -0.98
SCFD1-201ENST00000311943 GINS3Q9BRX5 216 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 RABAC1Q9UI14 185 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 ALG5Q9Y673 324 aa8.93□□□□□ -0.98
SCFD1-201ENST00000311943 BUB3O43684 328 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 DEFA1P59665 94 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 DEFA3P59666 94 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 NHLH2Q02577 135 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 NOXA1Q86UR1 476 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 THAP8Q8NA92 274 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 GLMPQ8WWB7 406 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 C17orf77Q96MU5 243 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 UHRF2Q96PU4 802 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 MAP6D1Q9H9H5 199 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 ORM2P19652 201 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 RCHY1Q96PM5 261 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 RAB40CQ96S21 281 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 CACFD1Q9UGQ2 172 aa8.92□□□□□ -0.98
SCFD1-201ENST00000311943 TRAV25A0A0B4J276 109 aa8.91□□□□□ -0.98
SCFD1-201ENST00000311943 SNRPGP15A8MWD9 76 aa8.91□□□□□ -0.98
SCFD1-201ENST00000311943 SSNA1O43805 119 aa8.91□□□□□ -0.98
SCFD1-201ENST00000311943 HNRNPCP07910 306 aaKnown RBP eCLIP8.91□□□□□ -0.988e-7■□□□□ 9.9
SCFD1-201ENST00000311943 ZNF688P0C7X2 276 aa8.91□□□□□ -0.98
SCFD1-201ENST00000311943 DEFB131AP59861 70 aa8.91□□□□□ -0.98
SCFD1-201ENST00000311943 MORN5Q5VZ52 161 aa8.91□□□□□ -0.98
SCFD1-201ENST00000311943 C16orf54Q6UWD8 224 aa8.91□□□□□ -0.98
SCFD1-201ENST00000311943 TMEM252Q8N6L7 170 aa8.91□□□□□ -0.98
SCFD1-201ENST00000311943 DCANP1Q8TF63 244 aa8.91□□□□□ -0.98
SCFD1-201ENST00000311943 GPN1Q9HCN4 374 aaPredicted RBP8.91□□□□□ -0.98
SCFD1-201ENST00000311943 PIGBOS1A0A0B4J2F0 54 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 A8MZ25 164 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 L7N2F9 121 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 TSC22D2O75157 780 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 VAMP2P63027 116 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 Q5BKY6 102 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 IGFL4Q6B9Z1 124 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 LAMTOR1Q6IAA8 161 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 OR10P1Q8NGE3 313 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 TRGV9Q99603 122 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 TM2D3Q9BRN9 247 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 RNF126Q9BV68 326 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 SCRT1Q9BWW7 348 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 SLC25A22Q9H936 323 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 MGAT4CQ9UBM8 478 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 RFNGQ9Y644 331 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 U3KQK5 164 aa8.9□□□□□ -0.98
SCFD1-201ENST00000311943 KNCNA6PVL3 124 aa8.9□□□□□ -0.99
SCFD1-201ENST00000311943 RPP30P78346 268 aaKnown RBP8.9□□□□□ -0.99
SCFD1-201ENST00000311943 PATE2Q6UY27 113 aa8.9□□□□□ -0.99
SCFD1-201ENST00000311943 TMEM144Q7Z5S9 345 aa8.9□□□□□ -0.99
SCFD1-201ENST00000311943 BPIFCQ8NFQ6 507 aa8.9□□□□□ -0.99
SCFD1-201ENST00000311943 OR11H7Q8NGC8 314 aa8.9□□□□□ -0.99
SCFD1-201ENST00000311943 OR1B1Q8NGR6 318 aa8.9□□□□□ -0.99
SCFD1-201ENST00000311943 MGST2Q99735 147 aa8.9□□□□□ -0.99
SCFD1-201ENST00000311943 K7EQG2 157 aa8.89□□□□□ -0.99
SCFD1-201ENST00000311943 DNASE2O00115 360 aaPredicted RBP8.89□□□□□ -0.99
SCFD1-201ENST00000311943 DEDDO75618 318 aa8.89□□□□□ -0.99
SCFD1-201ENST00000311943 ATP5IP56385 69 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms