RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RCHY1Q96PM5 261 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 USP54Q70EL1 1684 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 D6R8Y8 96 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 RPL34P49207 117 aaKnown RBP11.24□□□□□ -0.61
TRIM56-201ENST00000306085 RPL23P62829 140 aaKnown RBP11.24□□□□□ -0.61
TRIM56-201ENST00000306085 IGHV3-53P01767 116 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 SIGLEC15Q6ZMC9 328 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 GREB1LQ9C091 1923 aaPredicted RBP11.24□□□□□ -0.61
TRIM56-201ENST00000306085 CENPVL1A0A0U1RR11 272 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 TIMM21Q9BVV7 248 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 TRBV5-5A0A0J9YX44 114 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 LHBP01229 141 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 RPL35AP18077 110 aaKnown RBP11.24□□□□□ -0.61
TRIM56-201ENST00000306085 DLEC1Q9Y238 1755 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 TRAV14DV4A0A0A6YYC5 116 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 B9A039 149 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 UBE2CO00762 179 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 NKAPP1Q8N9T2 125 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 KLF17Q5JT82 389 aaPredicted RBP11.24□□□□□ -0.61
TRIM56-201ENST00000306085 ACP7Q6ZNF0 438 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 PRSS23O95084 383 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 C17orf98A8MV24 154 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 DLEU1O43261 78 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 FGF11Q92914 225 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 RNF125Q96EQ8 232 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 SIGLEC1Q9BZZ2 1709 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 SMPXQ9UHP9 88 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 IFITM3Q01628 133 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 SLC25A38Q96DW6 304 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 DPM3Q9P2X0 92 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 PEX11BO96011 259 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 BCORQ6W2J9 1755 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 IGKV2-40A0A087WW87 121 aaPredicted RBP11.23□□□□□ -0.61
TRIM56-201ENST00000306085 TNFSF13O75888 250 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 DUSP14O95147 198 aaKnown RBP11.23□□□□□ -0.61
TRIM56-201ENST00000306085 IGKV2D-40P01614 121 aaPredicted RBP11.23□□□□□ -0.61
TRIM56-201ENST00000306085 DEFB121Q5J5C9 76 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 C19orf48Q6RUI8 117 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 OSR1Q8TAX0 266 aaPredicted RBP11.23□□□□□ -0.61
TRIM56-201ENST00000306085 C7orf69Q9H7B7 122 aa11.23□□□□□ -0.61
TRIM56-201ENST00000306085 IGHV1-45A0A0A0MS14 117 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 EFEMP2O95967 443 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 UBL5Q9BZL1 73 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 PRIMA1Q86XR5 153 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 MYMXA0A1B0GTQ4 84 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 MESP2Q0VG99 397 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 SPXQ9BT56 116 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 SCN10AQ9Y5Y9 1956 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 PYYP10082 97 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 HIST1H2BLQ99880 126 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 CHAC1Q9BUX1 264 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 TCF15Q12870 199 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 HAPLN4Q86UW8 402 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 SPSB2Q99619 263 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 PATE3B3GLJ2 98 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 MMP23AO75900 390 aa11.22□□□□□ -0.61
TRIM56-201ENST00000306085 SS18Q15532 418 aa11.21□□□□□ -0.61
TRIM56-201ENST00000306085 R3HDMLQ9H3Y0 253 aa11.21□□□□□ -0.61
TRIM56-201ENST00000306085 C2CD3Q4AC94 2353 aa11.21□□□□□ -0.61
TRIM56-201ENST00000306085 LOC101059948A0A1B0GTJ6 334 aa11.21□□□□□ -0.61
TRIM56-201ENST00000306085 AMELYQ99218 206 aa11.21□□□□□ -0.61
TRIM56-201ENST00000306085 ATRAIDQ6UW56 229 aa11.21□□□□□ -0.61
TRIM56-201ENST00000306085 DEPPQ9NTK1 212 aa11.21□□□□□ -0.61
TRIM56-201ENST00000306085 ZNF831Q5JPB2 1677 aa11.21□□□□□ -0.61
TRIM56-201ENST00000306085 CGB3P0DN86 165 aa11.21□□□□□ -0.62
TRIM56-201ENST00000306085 CGB7P0DN87 165 aa11.21□□□□□ -0.62
TRIM56-201ENST00000306085 BSPH1Q075Z2 132 aa11.21□□□□□ -0.62
TRIM56-201ENST00000306085 CLPSP04118 112 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 SRXN1Q9BYN0 137 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 FAM90A9PA6NNJ1 464 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 RAMP3O60896 148 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 ZNF876PQ49A33 203 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 IGHG4P01861 327 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 CD24P25063 80 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 CCL20P78556 96 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 TM4SF5O14894 197 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 ZIC4Q8N9L1 334 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 CSTL1Q9H114 145 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 RHOGP84095 191 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 UBE2V1Q13404 147 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 STRCQ7RTU9 1775 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 HIVEP3Q5T1R4 2406 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 TRBV20-1A0A075B6N2 111 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 SAP30O75446 220 aa11.2□□□□□ -0.62
TRIM56-201ENST00000306085 NBR2O15453 112 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 PRR19A6NJB7 356 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 SLC25A47Q6Q0C1 308 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 CISD3P0C7P0 127 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 IQCF6A8MYZ5 107 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 CT83Q5H943 113 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 ARID2Q68CP9 1835 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 GPR179Q6PRD1 2367 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 CXorf51AA0A1B0GTR3 108 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.19□□□□□ -0.62
TRIM56-201ENST00000306085 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 CEACAM1P13688 526 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 RPL15P61313 204 aaKnown RBP11.19□□□□□ -0.62
TRIM56-201ENST00000306085 NBL1P41271 181 aa11.19□□□□□ -0.62
TRIM56-201ENST00000306085 RPL36AP83881 106 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms