RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TM4SF20Q53R12 229 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 OTOGLQ3ZCN5 2332 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 MED13Q9UHV7 2174 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 BRCA2P51587 3418 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 PLP1P60201 277 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 PPP1R27Q86WC6 154 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 RABAC1Q9UI14 185 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 A0A1W2PS18 150 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 CD24P25063 80 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 PSG9Q00887 426 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 PRSS8Q16651 343 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 SCRT1Q9BWW7 348 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 RNASE2P10153 161 aaKnown RBP10.86□□□□□ -0.67
DDX54-201ENST00000306014 FBLN7Q53RD9 439 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 LINC01560Q8TB33 94 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 C20orf144Q9BQM9 153 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 OTORQ9NRC9 128 aa10.86□□□□□ -0.67
DDX54-201ENST00000306014 NOTCH3Q9UM47 2321 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 YPEL3P61236 119 aaPredicted RBP10.85□□□□□ -0.67
DDX54-201ENST00000306014 Q0VG73 95 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 KHDC1LQ5JSQ8 128 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 ABHD17AQ96GS6 310 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 KLK15Q9H2R5 256 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 LYNX1G3V0Z9 82 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 ZNF207O43670 478 aaKnown RBP10.85□□□□□ -0.67
DDX54-201ENST00000306014 LYNX1P0DP58 116 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 SAPCD1Q5SSQ6 148 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 EXOC3-AS1Q8N2X6 119 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 TRAV8-1A0A0A6YYK1 113 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 ZNF134P52741 427 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 Q6ZPA2 131 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 MALRD1Q5VYJ5 2156 aa10.85□□□□□ -0.67
DDX54-201ENST00000306014 IGHV3-49A0A0A0MS15 119 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 RPS20P60866 119 aaKnown RBP10.84□□□□□ -0.67
DDX54-201ENST00000306014 ASPHD1Q5U4P2 390 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 CIARTQ8N365 385 aaPredicted RBP10.84□□□□□ -0.67
DDX54-201ENST00000306014 TMEM133Q9H2Q1 129 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 KRTAP27-1Q3LI81 207 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 TMEM200BQ69YZ2 307 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 PYGO2Q9BRQ0 406 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 GPR183P32249 361 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 ZNF138P52744 262 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 ATP5L2Q7Z4Y8 100 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 MCRIP2Q9BUT9 160 aaKnown RBP10.84□□□□□ -0.67
DDX54-201ENST00000306014 TMEM14BQ9NUH8 114 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 hDV102S1A0JD36 115 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 B9A039 149 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 CENPVQ7Z7K6 275 aaPredicted RBP10.84□□□□□ -0.67
DDX54-201ENST00000306014 ORMDL3Q8N138 153 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 FAM57AQ8TBR7 257 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 GAFA1Q96PS6 74 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 DPM3Q9P2X0 92 aa10.84□□□□□ -0.67
DDX54-201ENST00000306014 IGHV3-66A0A0C4DH42 116 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 GGTLC3B5MD39 225 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 H0YJW9 148 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 APOBEC3AP31941 199 aaPredicted RBP10.83□□□□□ -0.68
DDX54-201ENST00000306014 DUX4L9Q6RFH8 374 aaPredicted RBP10.83□□□□□ -0.68
DDX54-201ENST00000306014 ZNF502Q8TBZ5 544 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 C16orf92Q96LL3 132 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 SELENOKQ9Y6D0 94 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.83□□□□□ -0.683e-8■■■■□ 26.5
DDX54-201ENST00000306014 TRBV20OR9-2A0A075B6H5 130 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 C15orf65H3BRN8 121 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 NPPCP23582 126 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 TSPOP30536 169 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 SLC25A48Q6ZT89 311 aaKnown RBP10.83□□□□□ -0.68
DDX54-201ENST00000306014 C11orf1Q9H5F2 150 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 UBTD1Q9HAC8 227 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 PSG8Q9UQ74 426 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 V9GYV3 84 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 PSG1P11464 419 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 PLA2G5P39877 138 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.83□□□□□ -0.68
DDX54-201ENST00000306014 DMRTC2Q8IXT2 367 aaPredicted RBP10.83□□□□□ -0.68
DDX54-201ENST00000306014 F2Z2F3 143 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 TCRAP04437 139 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 FAM106CPP0CH98 169 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 COA6Q5JTJ3 125 aaKnown RBP10.82□□□□□ -0.68
DDX54-201ENST00000306014 C8orf46Q8TAG6 207 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 TMEM167AQ8TBQ9 72 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 C21orf62Q9NYP8 219 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 MED12LQ86YW9 2145 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 ADAMTS9Q9P2N4 1935 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 MPV17L2Q567V2 206 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 PRSS33Q8NF86 280 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 RNF125Q96EQ8 232 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 RAXQ9Y2V3 346 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 CHD3Q12873 2000 aaKnown RBP10.82□□□□□ -0.68
DDX54-201ENST00000306014 TMEM131Q92545 1883 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 TNCP24821 2201 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 LOC105371242A0A075B767 164 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 TRAV8-6A0A0B4J262 113 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 PMS2P5A8MQ11 134 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 LDLRAD2Q5SZI1 272 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 C18orf32Q8TCD1 76 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 TMEM160Q9NX00 188 aa10.82□□□□□ -0.68
DDX54-201ENST00000306014 MRPL27Q9P0M9 148 aaKnown RBP10.82□□□□□ -0.68
DDX54-201ENST00000306014 IGHG3P01860 377 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 NPSP0C0P6 89 aa10.81□□□□□ -0.68
DDX54-201ENST00000306014 NBL1P41271 181 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms