RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CENPVL3A0A0U1RRI6 287 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 C5orf52A6NGY3 159 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 A6NJY4 79 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 K7EN84 100 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 IGKV1-17P01599 117 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 CRYBB3P26998 211 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 OR1L4Q8NGR5 311 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 FAM168AQ92567 244 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 FXYD5Q96DB9 178 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 FAM210BQ96KR6 192 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 FANCD2OSQ96PS1 177 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 NEU1Q99519 415 aa5.17□□□□□ -1.58
USP47-201ENST00000305481 CENPEQ02224 2701 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 PHOX2AO14813 284 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 SNRPCP09234 159 aaKnown RBP5.16□□□□□ -1.58
USP47-201ENST00000305481 SUMO1P63165 101 aaKnown RBP5.16□□□□□ -1.58
USP47-201ENST00000305481 PAX8Q06710 450 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 Q8N9W7 124 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 OR1B1Q8NGR6 318 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 PYGO2Q9BRQ0 406 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 IGHV4-30-2A0A087WSY4 118 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 ELOA3CA0A087WX78 387 aaPredicted RBP5.16□□□□□ -1.58
USP47-201ENST00000305481 A0A1W2PRE2 83 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 H7BYZ3 331 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 PSG1P11464 419 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 HNF1AP20823 631 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 PLP1P60201 277 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 UBE2L3P68036 154 aaKnown RBP5.16□□□□□ -1.58
USP47-201ENST00000305481 CLEC12BQ2HXU8 276 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 TIGITQ495A1 244 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 ARPC1AQ92747 370 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 ANAPC16Q96DE5 110 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 PAXXQ9BUH6 204 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 OR51M1Q9H341 326 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 IGLV11-55A0A075B6I3 123 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 IGHV7-81A0A0B4J1V7 117 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 NPIPB5A8MRT5 1133 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 NPFFO15130 113 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 TRGC2P03986 189 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 GALR1P47211 349 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 ATP5J2P56134 94 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 TTC9CQ8N5M4 171 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 C22orf15Q8WYQ4 148 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 PIMREGQ9BSJ6 248 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 S4R3C0 116 aa5.16□□□□□ -1.58
USP47-201ENST00000305481 FAM208BQ5VWN6 2430 aa5.15□□□□□ -1.58
USP47-201ENST00000305481 F8W735 103 aaPredicted RBP5.15□□□□□ -1.58
USP47-201ENST00000305481 HYPMO75409 117 aa5.15□□□□□ -1.58
USP47-201ENST00000305481 FAM106CPP0CH98 169 aa5.15□□□□□ -1.58
USP47-201ENST00000305481 CD99P14209 185 aa5.15□□□□□ -1.58
USP47-201ENST00000305481 LEMD1Q68G75 181 aa5.15□□□□□ -1.58
USP47-201ENST00000305481 SFRP2Q96HF1 295 aa5.15□□□□□ -1.58
USP47-201ENST00000305481 HSPB9Q9BQS6 159 aa5.15□□□□□ -1.58
USP47-201ENST00000305481 IGHV3OR16-10A0A075B7F0 116 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HELTA6NFD8 242 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 C9JCJ5 164 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 MYCNOSP40205 109 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 TEX38Q6PEX7 206 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 PERPQ96FX8 193 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 CLUHP3Q96NS8 147 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 NDUFS8O00217 210 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 UBE2CO00762 179 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST1H2BKO60814 126 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST1H2BJP06899 126 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 GP9P14770 177 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST1H2BOP23527 126 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST1H2BBP33778 126 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 FAM3BP58499 235 aaPredicted RBP5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST1H2BDP58876 126 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST1H2BCP62807 126 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST2H2BEQ16778 126 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 CENPWQ5EE01 88 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.15□□□□□ -1.59
USP47-201ENST00000305481 ZNF329Q86UD4 541 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST1H2BHQ93079 126 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 LINC00479Q96M42 142 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST1H2BNQ99877 126 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 HIST1H2BMQ99879 126 aa5.15□□□□□ -1.59
USP47-201ENST00000305481 MRPL27Q9P0M9 148 aaKnown RBP5.15□□□□□ -1.59
USP47-201ENST00000305481 POLQO75417 2590 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 LINC01548A6NM66 108 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 GGCTO75223 188 aaKnown RBP5.14□□□□□ -1.59
USP47-201ENST00000305481 IGLV2-8P01709 118 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 HLA-DRB1P01911 266 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 OR5I1Q13606 314 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 BCL6BQ8N143 479 aaPredicted RBP5.14□□□□□ -1.59
USP47-201ENST00000305481 OR1L6Q8NGR2 347 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 FRZBQ92765 325 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 IGF2BP2-AS1Q96M15 143 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 RASL11BQ9BPW5 248 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 SOX21Q9Y651 276 aaPredicted RBP5.14□□□□□ -1.59
USP47-201ENST00000305481 SRP14P37108 136 aaKnown RBP5.14□□□□□ -1.59
USP47-201ENST00000305481 LYZP61626 148 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 FABP9Q0Z7S8 132 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 TMEM95Q3KNT9 176 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 BRD3OSQ6XYD6 125 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 PIFOQ8TCI5 191 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 OR5B12Q96R08 314 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 LY96Q9Y6Y9 160 aa5.14□□□□□ -1.59
USP47-201ENST00000305481 A0A1W2PPQ1 181 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms