RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 PARLQ9H300 379 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 TMEM241Q24JQ0 296 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 LINC00305Q7Z4B0 112 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 TTC9CQ8N5M4 171 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 NAT8Q9UHE5 227 aa11.47□□□□□ -0.57
SHCBP1-201ENST00000303383 SH2D7A6NKC9 451 aaPredicted RBP11.46□□□□□ -0.57
SHCBP1-201ENST00000303383 MFAP4P55083 255 aa11.46□□□□□ -0.57
SHCBP1-201ENST00000303383 TIGITQ495A1 244 aa11.46□□□□□ -0.57
SHCBP1-201ENST00000303383 HSPB9Q9BQS6 159 aa11.46□□□□□ -0.57
SHCBP1-201ENST00000303383 OR2J3O76001 311 aa11.46□□□□□ -0.58
SHCBP1-201ENST00000303383 RD3LP0DJH9 198 aa11.46□□□□□ -0.58
SHCBP1-201ENST00000303383 GPR61Q9BZJ8 451 aa11.46□□□□□ -0.58
SHCBP1-201ENST00000303383 K7EIM0 57 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 TRAV5A0A0B4J249 113 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 H3BUX3 64 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 ATP6V0E1O15342 81 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 OR51G1Q8NGK1 321 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 SGMS2Q8NHU3 365 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 PAXXQ9BUH6 204 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 NDUFB4O95168 129 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 IGLC1P0CG04 106 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 PSG1P11464 419 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 C16orf82Q7Z2V1 217 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 LRRC75A-AS1Q8N1F1 130 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 MEGF9Q9H1U4 602 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 PITPNC1Q9UKF7 332 aa11.45□□□□□ -0.58
SHCBP1-201ENST00000303383 TRAV30A0A087WSZ9 112 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 OR2C1O95371 312 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 SAPCD1Q5SSQ6 148 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 ASPHD1Q5U4P2 390 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 ISOC2Q96AB3 205 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 NIT2Q9NQR4 276 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 C21orf62Q9NYP8 219 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 HIGD1AQ9Y241 93 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 YTHDF2Q9Y5A9 579 aaKnown RBP11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 B4DEV8 164 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 HIST1H1BP16401 226 aaKnown RBP11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 LOXL1Q08397 574 aaPredicted RBP11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 NEU1Q99519 415 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 SDF2L1Q9HCN8 221 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 FBXL7Q9UJT9 491 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 IGLV11-55A0A075B6I3 123 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 C5orf56Q8N8D9 126 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 STXBP6Q8NFX7 210 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 Q96MF0 132 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 OR51M1Q9H341 326 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 CREBBPQ92793 2442 aa11.44□□□□□ -0.58
SHCBP1-201ENST00000303383 J3QLI3 93 aa11.43□□□□□ -0.58
SHCBP1-201ENST00000303383 S100PP25815 95 aa11.43□□□□□ -0.58
SHCBP1-201ENST00000303383 PATE2Q6UY27 113 aa11.43□□□□□ -0.58
SHCBP1-201ENST00000303383 FANCD2OSQ96PS1 177 aa11.43□□□□□ -0.58
SHCBP1-201ENST00000303383 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
SHCBP1-201ENST00000303383 TAS2R60P59551 318 aa11.43□□□□□ -0.58
SHCBP1-201ENST00000303383 MORN5Q5VZ52 161 aa11.43□□□□□ -0.58
SHCBP1-201ENST00000303383 FAM110DQ8TAY7 271 aaPredicted RBP11.43□□□□□ -0.58
SHCBP1-201ENST00000303383 SLC25A2Q9BXI2 301 aa11.43□□□□□ -0.58
SHCBP1-201ENST00000303383 SOX21Q9Y651 276 aaPredicted RBP11.43□□□□□ -0.58
SHCBP1-201ENST00000303383 SCO2A0A1W2PP80 73 aa11.42□□□□□ -0.58
SHCBP1-201ENST00000303383 PSMB11A5LHX3 300 aa11.42□□□□□ -0.58
SHCBP1-201ENST00000303383 AVPP01185 164 aa11.42□□□□□ -0.58
SHCBP1-201ENST00000303383 PYYP10082 97 aa11.42□□□□□ -0.58
SHCBP1-201ENST00000303383 S100A7AQ86SG5 101 aa11.42□□□□□ -0.58
SHCBP1-201ENST00000303383 C15orf54Q8N8G6 183 aa11.42□□□□□ -0.58
SHCBP1-201ENST00000303383 NDUFB8O95169 186 aa11.42□□□□□ -0.58
SHCBP1-201ENST00000303383 SUMO1P63165 101 aaKnown RBP11.42□□□□□ -0.58
SHCBP1-201ENST00000303383 Q8WTZ3 238 aa11.42□□□□□ -0.58
SHCBP1-201ENST00000303383 MT-ND4LP03901 98 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 EGR2P11161 476 aaPredicted RBP11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 HIST2H2BCQ6DN03 193 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 CELSR2Q9HCU4 2923 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 G3V318 75 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 CIDEAO60543 219 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 IL4P05112 153 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 SNRPCP09234 159 aaKnown RBP11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 BLNKQ8WV28 456 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 ARL2-SNX15V9GYD0 113 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 IGKV1-17P01599 117 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 FAM24BQ8N5W8 94 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 MS4A10Q96PG2 267 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 URGCP-MRPS24S4R325 110 aa11.41□□□□□ -0.58
SHCBP1-201ENST00000303383 A0A087WWC5 75 aa11.4□□□□□ -0.58
SHCBP1-201ENST00000303383 M0QZK8 103 aa11.4□□□□□ -0.58
SHCBP1-201ENST00000303383 RHOGP84095 191 aa11.4□□□□□ -0.58
SHCBP1-201ENST00000303383 ZNF503Q96F45 646 aa11.4□□□□□ -0.58
SHCBP1-201ENST00000303383 FAM167A-AS1Q96KT0 104 aa11.4□□□□□ -0.58
SHCBP1-201ENST00000303383 MLXQ9UH92 298 aa11.4□□□□□ -0.58
SHCBP1-201ENST00000303383 A0A1W2PRE2 83 aa11.4□□□□□ -0.58
SHCBP1-201ENST00000303383 OR2T8A6NH00 312 aa11.4□□□□□ -0.58
SHCBP1-201ENST00000303383 LINC00527Q9UJ94 153 aa11.4□□□□□ -0.58
SHCBP1-201ENST00000303383 C15orf32Q32M92 178 aa11.4□□□□□ -0.59
SHCBP1-201ENST00000303383 LEMD1Q68G75 181 aa11.4□□□□□ -0.59
SHCBP1-201ENST00000303383 PIFOQ8TCI5 191 aa11.4□□□□□ -0.59
SHCBP1-201ENST00000303383 DERL1Q9BUN8 251 aa11.4□□□□□ -0.59
SHCBP1-201ENST00000303383 TUBA4BQ9H853 241 aa11.4□□□□□ -0.59
SHCBP1-201ENST00000303383 A0A096LNT2 108 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 TRAV41A0A0B4J266 112 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 LINC01548A6NM66 108 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 TOMM40O96008 361 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 PLP1P60201 277 aa11.39□□□□□ -0.59
SHCBP1-201ENST00000303383 RPL23P62829 140 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms