RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 WDR83OSQ9Y284 106 aa17.17■□□□□ 0.34
LINC01116-201ENST00000295549 SMLR1H3BR10 107 aa17.16■□□□□ 0.34
LINC01116-201ENST00000295549 CFDP00746 253 aaPredicted RBP17.16■□□□□ 0.34
LINC01116-201ENST00000295549 FOLR2P14207 255 aa17.16■□□□□ 0.34
LINC01116-201ENST00000295549 CBLN1P23435 193 aa17.16■□□□□ 0.34
LINC01116-201ENST00000295549 SELENOTP62341 195 aa17.16■□□□□ 0.34
LINC01116-201ENST00000295549 CLINT1Q14677 625 aa17.16■□□□□ 0.34
LINC01116-201ENST00000295549 ADAMTSL5Q6ZMM2 481 aa17.16■□□□□ 0.34
LINC01116-201ENST00000295549 MRPL27Q9P0M9 148 aaKnown RBP17.16■□□□□ 0.34
LINC01116-201ENST00000295549 WI2-2373I1.2A0A1W2PRP0 233 aa17.15■□□□□ 0.34
LINC01116-201ENST00000295549 IL4P05112 153 aa17.15■□□□□ 0.34
LINC01116-201ENST00000295549 RAB31Q13636 194 aa17.15■□□□□ 0.34
LINC01116-201ENST00000295549 OXLD1Q5BKU9 147 aa17.15■□□□□ 0.34
LINC01116-201ENST00000295549 CYP2G1PQ6ZSU1 146 aa17.15■□□□□ 0.34
LINC01116-201ENST00000295549 TCTE3Q8IZS6 198 aa17.15■□□□□ 0.34
LINC01116-201ENST00000295549 UBE2L5PA0A1B0GUS4 154 aa17.14■□□□□ 0.33
LINC01116-201ENST00000295549 DFFBO76075 338 aa17.14■□□□□ 0.33
LINC01116-201ENST00000295549 SAMD5Q5TGI4 173 aa17.14■□□□□ 0.33
LINC01116-201ENST00000295549 RNF125Q96EQ8 232 aa17.14■□□□□ 0.33
LINC01116-201ENST00000295549 MGST2Q99735 147 aa17.14■□□□□ 0.33
LINC01116-201ENST00000295549 ATP5SQ99766 215 aa17.14■□□□□ 0.33
LINC01116-201ENST00000295549 RNF222A6NCQ9 220 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 AGPAT2O15120 278 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 ZNF207O43670 478 aaKnown RBP17.13■□□□□ 0.33
LINC01116-201ENST00000295549 MPDU1O75352 247 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 EDN2P20800 178 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 OR2F1Q13607 317 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 BTNL8Q6UX41 500 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 TMEM182Q6ZP80 229 aaPredicted RBP17.13■□□□□ 0.33
LINC01116-201ENST00000295549 AKAP14Q86UN6 197 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 BPIFCQ8NFQ6 507 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 SLC45A2Q9UMX9 530 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 IGHV7-4-1A0A0J9YVY3 117 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 HMSDA8MTL9 139 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 IGLV1-51P01701 117 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 NPPCP23582 126 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 CRYBB3P26998 211 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 CAMLGP49069 296 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 METTL26Q96S19 204 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 TECRQ9NZ01 308 aaKnown RBP17.13■□□□□ 0.33
LINC01116-201ENST00000295549 SMPXQ9UHP9 88 aa17.13■□□□□ 0.33
LINC01116-201ENST00000295549 G3V4G9 280 aa17.12■□□□□ 0.33
LINC01116-201ENST00000295549 GATA2P23769 480 aaPredicted RBP17.12■□□□□ 0.33
LINC01116-201ENST00000295549 USF2Q15853 346 aaPredicted RBP17.12■□□□□ 0.33
LINC01116-201ENST00000295549 OR11H4Q8NGC9 324 aa17.12■□□□□ 0.33
LINC01116-201ENST00000295549 SMIM3Q9BZL3 60 aa17.12■□□□□ 0.33
LINC01116-201ENST00000295549 ARPC5O15511 151 aa17.11■□□□□ 0.33
LINC01116-201ENST00000295549 FGF7P21781 194 aa17.11■□□□□ 0.33
LINC01116-201ENST00000295549 WDR61Q9GZS3 305 aaKnown RBP17.11■□□□□ 0.33
LINC01116-201ENST00000295549 WFDC1Q9HC57 220 aa17.11■□□□□ 0.33
LINC01116-201ENST00000295549 FBXL17Q9UF56 701 aa17.11■□□□□ 0.33
LINC01116-201ENST00000295549 NBEAL1Q6ZS30 2694 aa17.11■□□□□ 0.33
LINC01116-201ENST00000295549 PLP1P60201 277 aa17.1■□□□□ 0.33
LINC01116-201ENST00000295549 LYZP61626 148 aa17.1■□□□□ 0.33
LINC01116-201ENST00000295549 DEFB114Q30KQ6 69 aa17.1■□□□□ 0.33
LINC01116-201ENST00000295549 PBDC1Q9BVG4 233 aa17.1■□□□□ 0.33
LINC01116-201ENST00000295549 RHPN1-AS1Q9BWJ2 59 aa17.1■□□□□ 0.33
LINC01116-201ENST00000295549 PARD6GQ9BYG4 376 aaPredicted RBP17.1■□□□□ 0.33
LINC01116-201ENST00000295549 MLXQ9UH92 298 aa17.1■□□□□ 0.33
LINC01116-201ENST00000295549 RABAC1Q9UI14 185 aa17.1■□□□□ 0.33
LINC01116-201ENST00000295549 U3KQE9 123 aa17.1■□□□□ 0.33
LINC01116-201ENST00000295549 CHEK1O14757 476 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 IFNA5P01569 189 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 HNRNPCP07910 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC01116-201ENST00000295549 BMI1P35226 326 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 RPL29P47914 159 aaKnown RBP17.09■□□□□ 0.33
LINC01116-201ENST00000295549 EGFEM1PQ0D2K5 195 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 OR2K2Q8NGT1 345 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 DYNLRB2Q8TF09 96 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 GGTLC1Q9BX51 225 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 NPCDR1Q9BY65 106 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 MFFQ9GZY8 342 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 VSIRQ9H7M9 311 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 NOTCH1P46531 2555 aa17.09■□□□□ 0.33
LINC01116-201ENST00000295549 A0A1W2PS18 150 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 LINC00869P0C866 280 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 EIF2B2P49770 351 aaKnown RBP17.08■□□□□ 0.32
LINC01116-201ENST00000295549 AP2S1P53680 142 aaPredicted RBP17.08■□□□□ 0.32
LINC01116-201ENST00000295549 PRR20EP86478 221 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 PRR20CP86479 221 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 PRR20DP86480 221 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 PRR20BP86481 221 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 PRR20AP86496 221 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 ZNF266Q14584 549 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 ZNF345Q14585 488 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 OPCMLQ14982 345 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 PXDC1Q5TGL8 231 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 NARS2Q96I59 477 aaKnown RBP17.08■□□□□ 0.32
LINC01116-201ENST00000295549 NEURL2Q9BR09 285 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 PFDN2Q9UHV9 154 aa17.08■□□□□ 0.32
LINC01116-201ENST00000295549 APOHP02749 345 aaPredicted RBP17.07■□□□□ 0.32
LINC01116-201ENST00000295549 KPRPQ5T749 579 aaPredicted RBP17.07■□□□□ 0.32
LINC01116-201ENST00000295549 STPG3Q8N7X2 389 aa17.07■□□□□ 0.32
LINC01116-201ENST00000295549 TMEM231Q9H6L2 316 aa17.07■□□□□ 0.32
LINC01116-201ENST00000295549 ZMAT5Q9UDW3 170 aaKnown RBP17.07■□□□□ 0.32
LINC01116-201ENST00000295549 IGHV3-49A0A0A0MS15 119 aa17.06■□□□□ 0.32
LINC01116-201ENST00000295549 C1QBP02746 253 aa17.06■□□□□ 0.32
LINC01116-201ENST00000295549 ORM2P19652 201 aa17.06■□□□□ 0.32
LINC01116-201ENST00000295549 CD300EQ496F6 205 aaPredicted RBP17.06■□□□□ 0.32
LINC01116-201ENST00000295549 MIC13Q5XKP0 118 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms