RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 OR9G4Q8NGQ1 327 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 GAGE2DQ9UEU5 116 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 SPTBN1Q01082 2364 aaKnown RBP9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 GNG5P63218 68 aa9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 BCL6BQ8N143 479 aaPredicted RBP9.39□□□□□ -0.91
NPC1L1-201ENST00000289547 TMEM262E9PQX1 116 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 HAX1O00165 279 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 CCL1P22362 96 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 KIR3DS1Q14943 382 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 Q6ZWC4 215 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 ZFAND6Q6FIF0 208 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 MCRIP2Q9BUT9 160 aaKnown RBP9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 FAM215AQ9Y5M1 114 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 NDUFA3O95167 84 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 IGHV1-46P01743 117 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 ATP5IP56385 69 aaPredicted RBP9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 FER1L6-AS1Q8NA97 138 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 RAMP3O60896 148 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 HBDP02042 147 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 CX3CL1P78423 397 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 PSG9Q00887 426 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 OR52E5Q8NH55 327 aa9.38□□□□□ -0.91
NPC1L1-201ENST00000289547 WNT9BO14905 357 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 OR4A5Q8NH83 315 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 TSKUQ8WUA8 353 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 HEATR1Q9H583 2144 aaKnown RBP9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 SH2D7A6NKC9 451 aaPredicted RBP9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 SYS1-DBNDD2H3BUS1 97 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 TMEM144Q7Z5S9 345 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 RPRMLQ8N4K4 120 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 DCTN5Q9BTE1 182 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 COL6A6A6NMZ7 2263 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 A0A1W2PS18 150 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 KIAA2026Q5HYC2 2103 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 DOCK9Q9BZ29 2069 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 FAM231BA6NCW3 169 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 HTN1P15515 57 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 FOXG1P55316 489 aaPredicted RBP9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 LOXL3P58215 753 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 ECSCRQ19T08 205 aa9.37□□□□□ -0.91
NPC1L1-201ENST00000289547 ROS1P08922 2347 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 CDKN1BP46527 198 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 DLX6P56179 175 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 QRFPP83859 136 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 IGKV1-12A0A0C4DH73 117 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 A8MWV9 139 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 IGKV1D-12P01611 117 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 PYYP10082 97 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 Q0VG73 95 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 LY6EQ16553 131 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 PSG3Q16557 428 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 OR4C13Q8NGP0 309 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 COQ2Q96H96 371 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 IGHV3OR16-10A0A075B7F0 116 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 TRAV24A0A0B4J272 114 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 HOXA3O43365 443 aaPredicted RBP9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 LEPP41159 167 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 MRPL27Q9P0M9 148 aaKnown RBP9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 DPM3Q9P2X0 92 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 LSM4Q9Y4Z0 139 aaKnown RBP9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 A0A1B0GW15 77 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 C9JCJ5 164 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 SPINK8P0C7L1 97 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 TMEM95Q3KNT9 176 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 Q6ZVH6 145 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 NABP1Q96AH0 204 aa9.36□□□□□ -0.91
NPC1L1-201ENST00000289547 IGKV3-15P01624 115 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 ERVK11-1P61568 191 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 WDR82Q6UXN9 313 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 LINC01356Q8N9X3 169 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 WDR31Q8NA23 367 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 FMC1Q96HJ9 113 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 SCGB3A1Q96QR1 104 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 PHLDA3Q9Y5J5 127 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 LINC00312Q9Y6C7 94 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 SPATA31B1PQ5VZV4 182 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 ZNRF1Q8ND25 227 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 GGTLC1Q9BX51 225 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 LRRK1Q38SD2 2015 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 MYLKQ15746 1914 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 PLCE1Q9P212 2302 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 Q6AWC8 147 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 TREML4Q6UXN2 200 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 C5orf24Q7Z6I8 188 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 FAM216BQ8N7L0 139 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 DYNLRB2Q8TF09 96 aa9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 INTS1Q8N201 2190 aaKnown RBP9.35□□□□□ -0.91
NPC1L1-201ENST00000289547 DPM2O94777 84 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 PRSS8Q16651 343 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 CENPVQ7Z7K6 275 aaPredicted RBP9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 OR13A1Q8NGR1 328 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 TMEM14EPQ6UXP3 125 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 ATP5L2Q7Z4Y8 100 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 RNASE8Q8TDE3 154 aaKnown RBP9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 EPDR1Q9UM22 224 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 K7EP13 123 aa9.34□□□□□ -0.91
NPC1L1-201ENST00000289547 IGKV1-5P01602 117 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms