RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 LFNGQ8NES3 379 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 OR5R1Q8NH85 324 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 LYPD6BQ8NI32 183 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 PSMG3-AS1Q96PY0 264 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 SEC11CQ9BY50 192 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 MAP1LC3B2A6NCE7 125 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 SEC14L6B5MCN3 397 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 PPP1R2P9O14990 202 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 SMAD7O15105 426 aaKnown RBP8.71□□□□□ -1.02
GGPS1-201ENST00000282841 HSPB1P04792 205 aaKnown RBP8.71□□□□□ -1.02
GGPS1-201ENST00000282841 RND2P52198 227 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 RPL19P84098 196 aaKnown RBP8.71□□□□□ -1.02
GGPS1-201ENST00000282841 DEFB113Q30KQ7 82 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 C2orf83Q53S99 150 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 FAM24BQ8N5W8 94 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 STPG3Q8N7X2 389 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 OR4A5Q8NH83 315 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 MAP1LC3BQ9GZQ8 125 aa8.71□□□□□ -1.02
GGPS1-201ENST00000282841 PRB4P10163 310 aaPredicted RBP8.7□□□□□ -1.02
GGPS1-201ENST00000282841 CD69Q07108 199 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 BSXQ3C1V8 233 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 IL34Q6ZMJ4 242 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 MALSU1Q96EH3 234 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 PSMG3Q9BT73 122 aaPredicted RBP8.7□□□□□ -1.02
GGPS1-201ENST00000282841 WNT10AQ9GZT5 417 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 CR1P17927 2039 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 IGHV1-69DA0A0B4J2H0 117 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 K7EP13 123 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 CCL25O15444 150 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 IGHV1-69P01742 117 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 DLK1P80370 383 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 CCDC144NLQ6NUI1 221 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 WFDC11Q8NEX6 87 aa8.7□□□□□ -1.02
GGPS1-201ENST00000282841 ZNF48Q96MX3 618 aaPredicted RBP8.7□□□□□ -1.02
GGPS1-201ENST00000282841 LSM4Q9Y4Z0 139 aaKnown RBP8.7□□□□□ -1.02
GGPS1-201ENST00000282841 B4DSR2 109 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 CD5P06127 495 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 TFPI2P48307 235 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 SERF2P84101 59 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 MINOS1Q5TGZ0 78 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 UHRF2Q96PU4 802 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 MINOS1-NBL1R4GNA1 71 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 A0A096LNT2 108 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 RBFOX3A6NFN3 312 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 GGCTO75223 188 aaKnown RBP8.69□□□□□ -1.02
GGPS1-201ENST00000282841 MT-CO2P00403 227 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 ECSCRQ19T08 205 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 IL17RELQ6ZVW7 336 aa8.69□□□□□ -1.02
GGPS1-201ENST00000282841 C17orf112F2Z3M2 114 aa8.68□□□□□ -1.02
GGPS1-201ENST00000282841 G3V318 75 aa8.68□□□□□ -1.02
GGPS1-201ENST00000282841 FAM106CPP0CH98 169 aa8.68□□□□□ -1.02
GGPS1-201ENST00000282841 RPS10P46783 165 aaKnown RBP8.68□□□□□ -1.02
GGPS1-201ENST00000282841 ASPHD1Q5U4P2 390 aa8.68□□□□□ -1.02
GGPS1-201ENST00000282841 MORN5Q5VZ52 161 aa8.68□□□□□ -1.02
GGPS1-201ENST00000282841 Q8N9W7 124 aa8.68□□□□□ -1.02
GGPS1-201ENST00000282841 IGHV3-35A0A0C4DH35 117 aa8.68□□□□□ -1.02
GGPS1-201ENST00000282841 CYB5BO43169 146 aa8.68□□□□□ -1.02
GGPS1-201ENST00000282841 ZNF705AQ6ZN79 300 aaPredicted RBP8.68□□□□□ -1.02
GGPS1-201ENST00000282841 OTOGQ6ZRI0 2925 aa8.68□□□□□ -1.02
GGPS1-201ENST00000282841 IGHV3OR16-8A0A075B7F1 116 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 TRAV5A0A0B4J249 113 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 H3BUX3 64 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 NBEAP1P0C6P0 100 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 LINC00869P0C866 280 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 SELENOTP62341 195 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 ICAM4Q14773 271 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 Q6ZS46 218 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 MIR17HGQ75NE6 70 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 Q8N6K4 173 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 NPBQ8NG41 125 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 PIFOQ8TCI5 191 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 SLC35E1Q96K37 410 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 DUX5Q96PT3 197 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 ZFP30Q9Y2G7 519 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 TBL2Q9Y4P3 447 aaKnown RBP8.67□□□□□ -1.02
GGPS1-201ENST00000282841 IGHV7-81A0A0B4J1V7 117 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 A0A1W2PPV4 95 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 NDUFA3O95167 84 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 FAM78BQ5VT40 261 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 CENPVQ7Z7K6 275 aaPredicted RBP8.67□□□□□ -1.02
GGPS1-201ENST00000282841 HIST3H2BBQ8N257 126 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 CYB561D1Q8N8Q1 229 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 ARPC1AQ92747 370 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 TMUB1Q9BVT8 246 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 ARL14EPLP0DKL9 152 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 BRS3P32247 399 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 SUB1P53999 127 aaKnown RBP eCLIP8.67□□□□□ -1.021e-6■■■■■ 30.7
GGPS1-201ENST00000282841 ACOT6Q3I5F7 207 aaPredicted RBP8.67□□□□□ -1.02
GGPS1-201ENST00000282841 TMEM144Q7Z5S9 345 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 MS4A10Q96PG2 267 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 POLR3KQ9Y2Y1 108 aaPredicted RBP8.67□□□□□ -1.02
GGPS1-201ENST00000282841 TIMM9Q9Y5J7 89 aa8.67□□□□□ -1.02
GGPS1-201ENST00000282841 F11RQ9Y624 299 aaKnown RBP8.67□□□□□ -1.02
GGPS1-201ENST00000282841 IGKV1D-37A0A075B6S9 117 aa8.66□□□□□ -1.02
GGPS1-201ENST00000282841 OR10J4P0C629 311 aa8.66□□□□□ -1.02
GGPS1-201ENST00000282841 EGR2P11161 476 aaPredicted RBP8.66□□□□□ -1.02
GGPS1-201ENST00000282841 ORM2P19652 201 aa8.66□□□□□ -1.02
GGPS1-201ENST00000282841 KRTAP1-3Q8IUG1 177 aa8.66□□□□□ -1.02
GGPS1-201ENST00000282841 ZNF479Q96JC4 524 aa8.66□□□□□ -1.02
GGPS1-201ENST00000282841 RASL11BQ9BPW5 248 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms