RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 FAM106AQ4KMX7 169 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 TOMM20LQ6UXN7 152 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 UNQ9165/PRO28630Q6UXU0 137 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 C1QL4Q86Z23 238 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 SCGB1C1Q8TD33 95 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 Q8WTZ3 238 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 DLX4Q92988 240 aaPredicted RBP13.16□□□□□ -0.3
SKP2-201ENST00000274254 RCC1LQ96I51 464 aaKnown RBP13.16□□□□□ -0.3
SKP2-201ENST00000274254 ZFAND3Q9H8U3 227 aa13.16□□□□□ -0.3
SKP2-201ENST00000274254 BORCS7-ASMTA0A0B4J1R7 106 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 M0QZ24 198 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 LGALS9O00182 355 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 JTBO76095 146 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 TSPAN15O95858 294 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 GATA2P23769 480 aaPredicted RBP13.15□□□□□ -0.3
SKP2-201ENST00000274254 SYNJ2BPP57105 145 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 PRR20EP86478 221 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 PRR20CP86479 221 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 PRR20DP86480 221 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 PRR20BP86481 221 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 PRR20AP86496 221 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 OPCMLQ14982 345 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 REC114Q7Z4M0 266 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 OR51G1Q8NGK1 321 aa13.15□□□□□ -0.3
SKP2-201ENST00000274254 PF4P02776 101 aa13.14□□□□□ -0.31
SKP2-201ENST00000274254 RPL29P47914 159 aaKnown RBP13.14□□□□□ -0.31
SKP2-201ENST00000274254 LINC00482Q8N8I6 264 aa13.14□□□□□ -0.31
SKP2-201ENST00000274254 BPIFCQ8NFQ6 507 aa13.14□□□□□ -0.31
SKP2-201ENST00000274254 SPATA3Q8NHX4 192 aa13.14□□□□□ -0.31
SKP2-201ENST00000274254 RSG1Q9BU20 258 aa13.14□□□□□ -0.31
SKP2-201ENST00000274254 ARV1Q9H2C2 271 aa13.14□□□□□ -0.31
SKP2-201ENST00000274254 VWFP04275 2813 aa13.14□□□□□ -0.31
SKP2-201ENST00000274254 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 YIF1AO95070 293 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 CFDP00746 253 aaPredicted RBP13.13□□□□□ -0.31
SKP2-201ENST00000274254 LINC00869P0C866 280 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 STPG3Q8N7X2 389 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 PPP1R14BQ96C90 147 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 IGHV3OR16-8A0A075B7F1 116 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 ZNF320A2RRD8 509 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 A8MWP6 167 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 IL4P05112 153 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 PLP1P60201 277 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 USF2Q15853 346 aaPredicted RBP13.13□□□□□ -0.31
SKP2-201ENST00000274254 MIC13Q5XKP0 118 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 ZNF709Q8N972 641 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 HSD17B11Q8NBQ5 300 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 RNF125Q96EQ8 232 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 PXMP4Q9Y6I8 212 aa13.13□□□□□ -0.31
SKP2-201ENST00000274254 ANK2Q01484 3957 aa13.12□□□□□ -0.31
SKP2-201ENST00000274254 C17orf112F2Z3M2 114 aa13.12□□□□□ -0.31
SKP2-201ENST00000274254 HNRNPCP07910 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
SKP2-201ENST00000274254 ATP6V0CP27449 155 aa13.12□□□□□ -0.31
SKP2-201ENST00000274254 OR9G4Q8NGQ1 327 aa13.12□□□□□ -0.31
SKP2-201ENST00000274254 GINS3Q9BRX5 216 aa13.12□□□□□ -0.31
SKP2-201ENST00000274254 C20orf24Q9BUV8 137 aa13.12□□□□□ -0.31
SKP2-201ENST00000274254 ZNF471Q9BX82 626 aaPredicted RBP13.12□□□□□ -0.31
SKP2-201ENST00000274254 DAZ1Q9NQZ3 744 aaKnown RBP13.12□□□□□ -0.31
SKP2-201ENST00000274254 KCNIP2Q9NS61 270 aa13.12□□□□□ -0.31
SKP2-201ENST00000274254 SLC39A9Q9NUM3 307 aa13.12□□□□□ -0.31
SKP2-201ENST00000274254 TIMM9Q9Y5J7 89 aa13.12□□□□□ -0.31
SKP2-201ENST00000274254 TRRAPQ9Y4A5 3859 aa13.11□□□□□ -0.31
SKP2-201ENST00000274254 TMEM213A2RRL7 107 aa13.11□□□□□ -0.31
SKP2-201ENST00000274254 K7EMT4 169 aa13.11□□□□□ -0.31
SKP2-201ENST00000274254 OVOL1O14753 267 aa13.11□□□□□ -0.31
SKP2-201ENST00000274254 ELLP55199 621 aaPredicted RBP13.11□□□□□ -0.31
SKP2-201ENST00000274254 LYZP61626 148 aa13.11□□□□□ -0.31
SKP2-201ENST00000274254 B2MP61769 119 aa13.11□□□□□ -0.31
SKP2-201ENST00000274254 STOML3Q8TAV4 291 aa13.11□□□□□ -0.31
SKP2-201ENST00000274254 PSMG3Q9BT73 122 aaPredicted RBP13.11□□□□□ -0.31
SKP2-201ENST00000274254 UFC1Q9Y3C8 167 aa13.11□□□□□ -0.31
SKP2-201ENST00000274254 RFNGQ9Y644 331 aa13.11□□□□□ -0.31
SKP2-201ENST00000274254 C4BPBP20851 252 aa13.1□□□□□ -0.31
SKP2-201ENST00000274254 TM4SF20Q53R12 229 aa13.1□□□□□ -0.31
SKP2-201ENST00000274254 PXDC1Q5TGL8 231 aa13.1□□□□□ -0.31
SKP2-201ENST00000274254 IL34Q6ZMJ4 242 aa13.1□□□□□ -0.31
SKP2-201ENST00000274254 GNPNAT1Q96EK6 184 aaPredicted RBP13.1□□□□□ -0.31
SKP2-201ENST00000274254 SH3BGRL3Q9H299 93 aa13.1□□□□□ -0.31
SKP2-201ENST00000274254 PEMTQ9UBM1 199 aa13.1□□□□□ -0.31
SKP2-201ENST00000274254 BOLA1Q9Y3E2 137 aa13.1□□□□□ -0.31
SKP2-201ENST00000274254 CRYBB3P26998 211 aa13.09□□□□□ -0.31
SKP2-201ENST00000274254 Q6ZRG5 221 aa13.09□□□□□ -0.31
SKP2-201ENST00000274254 SLC51BQ86UW2 128 aa13.09□□□□□ -0.31
SKP2-201ENST00000274254 WFDC9Q8NEX5 89 aa13.09□□□□□ -0.31
SKP2-201ENST00000274254 OR2G3Q8NGZ4 309 aa13.09□□□□□ -0.31
SKP2-201ENST00000274254 PBDC1Q9BVG4 233 aa13.09□□□□□ -0.31
SKP2-201ENST00000274254 MRPL27Q9P0M9 148 aaKnown RBP13.09□□□□□ -0.31
SKP2-201ENST00000274254 NOTCH3Q9UM47 2321 aa13.09□□□□□ -0.31
SKP2-201ENST00000274254 C2orf70A6NJV1 201 aa13.08□□□□□ -0.31
SKP2-201ENST00000274254 ZNF207O43670 478 aaKnown RBP13.08□□□□□ -0.31
SKP2-201ENST00000274254 SPP1P10451 314 aa13.08□□□□□ -0.31
SKP2-201ENST00000274254 ORM2P19652 201 aa13.08□□□□□ -0.31
SKP2-201ENST00000274254 EIF5AP63241 154 aaKnown RBP13.08□□□□□ -0.31
SKP2-201ENST00000274254 PATE2Q6UY27 113 aa13.08□□□□□ -0.31
SKP2-201ENST00000274254 OR1B1Q8NGR6 318 aa13.08□□□□□ -0.31
SKP2-201ENST00000274254 METTL26Q96S19 204 aa13.08□□□□□ -0.31
SKP2-201ENST00000274254 RABAC1Q9UI14 185 aa13.08□□□□□ -0.31
SKP2-201ENST00000274254 HYPMO75409 117 aa13.08□□□□□ -0.32
SKP2-201ENST00000274254 C8orf88P0DMB2 117 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms