RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CCL21O00585 134 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 CDX4O14627 284 aaPredicted RBP9.53□□□□□ -0.88
VPS33A-201ENST00000267199 CD69Q07108 199 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 MLANAQ16655 118 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 TMEM30BQ3MIR4 351 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 FBXL15Q9H469 300 aa9.53□□□□□ -0.88
VPS33A-201ENST00000267199 UPK2O00526 184 aa9.52□□□□□ -0.88
VPS33A-201ENST00000267199 PRSS2P07478 247 aa9.52□□□□□ -0.88
VPS33A-201ENST00000267199 PRSS8Q16651 343 aa9.52□□□□□ -0.88
VPS33A-201ENST00000267199 ORAOV1Q8WV07 137 aa9.52□□□□□ -0.88
VPS33A-201ENST00000267199 C1RLQ9NZP8 487 aa9.52□□□□□ -0.88
VPS33A-201ENST00000267199 COX11Q9Y6N1 276 aa9.52□□□□□ -0.88
VPS33A-201ENST00000267199 C9JCJ5 164 aa9.52□□□□□ -0.89
VPS33A-201ENST00000267199 IGHV3-23P01764 117 aa9.52□□□□□ -0.89
VPS33A-201ENST00000267199 LYPD6Q86Y78 171 aa9.52□□□□□ -0.89
VPS33A-201ENST00000267199 CACNG8Q8WXS5 425 aa9.52□□□□□ -0.89
VPS33A-201ENST00000267199 BEX4Q9NWD9 120 aaPredicted RBP9.52□□□□□ -0.89
VPS33A-201ENST00000267199 ZNF257Q9Y2Q1 563 aa9.52□□□□□ -0.89
VPS33A-201ENST00000267199 IGKV1-39P01597 117 aa9.52□□□□□ -0.89
VPS33A-201ENST00000267199 IGKV1D-39P04432 117 aa9.52□□□□□ -0.89
VPS33A-201ENST00000267199 LOXL3P58215 753 aa9.52□□□□□ -0.89
VPS33A-201ENST00000267199 ASPHD1Q5U4P2 390 aa9.52□□□□□ -0.89
VPS33A-201ENST00000267199 ORMDL3Q8N138 153 aa9.52□□□□□ -0.89
VPS33A-201ENST00000267199 MRPL16Q9NX20 251 aaKnown RBP9.52□□□□□ -0.89
VPS33A-201ENST00000267199 HAPLN4Q86UW8 402 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 FAM90A1Q86YD7 464 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 NUP35Q8NFH5 326 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 IGHV1-69-2A0A0G2JMI3 117 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 SRRM5B3KS81 715 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 APOMO95445 188 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 IGLV3-1P01715 115 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 STPG4Q8N801 248 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 TEX45Q8NA69 505 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 COQ2Q96H96 371 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 GAGE12BA1L429 117 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 IGLC2P0DOY2 106 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 IGLC3P0DOY3 106 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 DGAT2L7PQ6IED9 249 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 PPIAL4CA0A0B4J2A2 164 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 F2Z2F3 143 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 GFRA3O60609 400 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 PPIAL4GP0DN37 164 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 RABAC1Q9UI14 185 aa9.51□□□□□ -0.89
VPS33A-201ENST00000267199 FOXA2Q9Y261 457 aaPredicted RBP9.51□□□□□ -0.89
VPS33A-201ENST00000267199 TM4SF5O14894 197 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 AREGP15514 252 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 FAM169BQ8N8A8 192 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 FMC1Q96HJ9 113 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 MED13Q9UHV7 2174 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 MALRD1Q5VYJ5 2156 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 MLNRO43193 412 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 SOX21Q9Y651 276 aaPredicted RBP9.5□□□□□ -0.89
VPS33A-201ENST00000267199 TRAV8-1A0A0A6YYK1 113 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 IGHV3-66A0A0C4DH42 116 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 PPIFP30405 207 aaKnown RBP9.5□□□□□ -0.89
VPS33A-201ENST00000267199 CD177Q8N6Q3 437 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 MDS2Q8NDY4 140 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 KIAA1549LQ6ZVL6 1849 aa9.5□□□□□ -0.89
VPS33A-201ENST00000267199 TRAV30A0A087WSZ9 112 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 MFAP4P55083 255 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 PRCDQ00LT1 54 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 TDRG1Q3Y452 100 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 RNFT1Q5M7Z0 435 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 F2RL2O00254 374 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 NDUFA3O95167 84 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 CD24P25063 80 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 GUSBP1Q15486 140 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 ATRXP46100 2492 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 SPG11Q96JI7 2443 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 ZNF503-AS2A6NEH8 195 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 SYS1-DBNDD2H3BUS1 97 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 CCDC144NLQ6NUI1 221 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 CIARTQ8N365 385 aaPredicted RBP9.49□□□□□ -0.89
VPS33A-201ENST00000267199 C16orf92Q96LL3 132 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 GTSF1LQ9H1H1 148 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 LINC00312Q9Y6C7 94 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 C17orf100A8MU93 164 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 BSPH1Q075Z2 132 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 MAJINQ3KP22 176 aa9.49□□□□□ -0.89
VPS33A-201ENST00000267199 NUPR1O60356 82 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 ASCL2Q99929 193 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 A0A0G2JLM5 398 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 NPIPB11E5RHQ5 1161 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 M0R381 172 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 RPS20P60866 119 aaKnown RBP9.48□□□□□ -0.89
VPS33A-201ENST00000267199 Q0VG73 95 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 CHODLQ9H9P2 273 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 PHLDA3Q9Y5J5 127 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 DENND4AQ7Z401 1863 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 TCRBV4S1A1TA0A5B7 111 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 LEPP41159 167 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 EXOC3-AS1Q8N2X6 119 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 PRR7Q8TB68 274 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 C18orf32Q8TCD1 76 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 CST9LQ9H4G1 147 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 MBNL3Q9NUK0 354 aaKnown RBP9.48□□□□□ -0.89
VPS33A-201ENST00000267199 NCR2O95944 276 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 HBDP02042 147 aa9.48□□□□□ -0.89
VPS33A-201ENST00000267199 SEC11AP67812 179 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms