RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 JTBO76095 146 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 ZNF688P0C7X2 276 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 GGNBP1Q5YKI7 109 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 STHQ8IWL8 128 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 TMEM217Q8N7C4 229 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 RNF125Q96EQ8 232 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 SLC35E1Q96K37 410 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 CIB3Q96Q77 187 aaPredicted RBP11.77□□□□□ -0.53
USE1-201ENST00000263897 MAGT1Q9H0U3 335 aa11.77□□□□□ -0.53
USE1-201ENST00000263897 LINC00854A0A1B0GVQ3 168 aa11.76□□□□□ -0.53
USE1-201ENST00000263897 CXorf65A6NEN9 183 aa11.76□□□□□ -0.53
USE1-201ENST00000263897 CA1P00915 261 aaPredicted RBP11.76□□□□□ -0.53
USE1-201ENST00000263897 RPP30P78346 268 aaKnown RBP11.76□□□□□ -0.53
USE1-201ENST00000263897 ZNF90Q03938 601 aa11.76□□□□□ -0.53
USE1-201ENST00000263897 TRPT1Q86TN4 253 aaKnown RBP11.76□□□□□ -0.53
USE1-201ENST00000263897 OR11H2Q8NH07 326 aa11.76□□□□□ -0.53
USE1-201ENST00000263897 NDUFA13Q9P0J0 144 aa11.76□□□□□ -0.53
USE1-201ENST00000263897 FLVCR2Q9UPI3 526 aa11.76□□□□□ -0.53
USE1-201ENST00000263897 KNCNA6PVL3 124 aa11.75□□□□□ -0.53
USE1-201ENST00000263897 WRBO00258 174 aa11.75□□□□□ -0.53
USE1-201ENST00000263897 FABP1P07148 127 aa11.75□□□□□ -0.53
USE1-201ENST00000263897 PMS2P11Q13670 270 aa11.75□□□□□ -0.53
USE1-201ENST00000263897 OR8G2PQ6IF36 304 aa11.75□□□□□ -0.53
USE1-201ENST00000263897 SIGLEC15Q6ZMC9 328 aa11.75□□□□□ -0.53
USE1-201ENST00000263897 RAB40CQ96S21 281 aa11.75□□□□□ -0.53
USE1-201ENST00000263897 PBDC1Q9BVG4 233 aa11.75□□□□□ -0.53
USE1-201ENST00000263897 SEPSECSQ9HD40 501 aaKnown RBP11.75□□□□□ -0.53
USE1-201ENST00000263897 NRN1Q9NPD7 142 aa11.75□□□□□ -0.53
USE1-201ENST00000263897 PFDN2Q9UHV9 154 aa11.75□□□□□ -0.53
USE1-201ENST00000263897 PAIP2BQ9ULR5 123 aaKnown RBP11.75□□□□□ -0.53
USE1-201ENST00000263897 RYR2Q92736 4967 aa11.74□□□□□ -0.53
USE1-201ENST00000263897 CENPXA8MT69 81 aa11.74□□□□□ -0.53
USE1-201ENST00000263897 SNRPGP15A8MWD9 76 aa11.74□□□□□ -0.53
USE1-201ENST00000263897 ADAP1O75689 374 aa11.74□□□□□ -0.53
USE1-201ENST00000263897 GIG44P09565 113 aaPredicted RBP11.74□□□□□ -0.53
USE1-201ENST00000263897 OR4E1P0C645 316 aa11.74□□□□□ -0.53
USE1-201ENST00000263897 ID3Q02535 119 aa11.74□□□□□ -0.53
USE1-201ENST00000263897 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
USE1-201ENST00000263897 TRGV9Q99603 122 aa11.74□□□□□ -0.53
USE1-201ENST00000263897 C7orf50Q9BRJ6 194 aaKnown RBP11.74□□□□□ -0.53
USE1-201ENST00000263897 LYSTQ99698 3801 aa11.74□□□□□ -0.53
USE1-201ENST00000263897 IGKV1OR2-108A0A075B7D4 117 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 NUPR2A6NF83 97 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 PRSS46E5RG02 174 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 SPP1P10451 314 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 IL7P13232 177 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 BTCP35070 178 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 NUP62P37198 522 aaPredicted RBP11.73□□□□□ -0.53
USE1-201ENST00000263897 TMEM41BQ5BJD5 291 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 PSMG4Q5JS54 123 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 ACTL10Q5JWF8 245 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 SPANXN5Q5MJ07 72 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 MORN3Q6PF18 240 aaPredicted RBP11.73□□□□□ -0.53
USE1-201ENST00000263897 THAP8Q8NA92 274 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 COQ8AQ8NI60 647 aa11.73□□□□□ -0.53
USE1-201ENST00000263897 IFNA21P01568 189 aa11.72□□□□□ -0.53
USE1-201ENST00000263897 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
USE1-201ENST00000263897 OR2F1Q13607 317 aa11.72□□□□□ -0.53
USE1-201ENST00000263897 C1orf194Q5T5A4 169 aa11.72□□□□□ -0.53
USE1-201ENST00000263897 C11orf68Q9H3H3 251 aaKnown RBP11.72□□□□□ -0.53
USE1-201ENST00000263897 STRAPQ9Y3F4 350 aaKnown RBP11.72□□□□□ -0.53
USE1-201ENST00000263897 ANXA7P20073 488 aaKnown RBP11.71□□□□□ -0.53
USE1-201ENST00000263897 LYZP61626 148 aa11.71□□□□□ -0.53
USE1-201ENST00000263897 CNPY1Q3B7I2 92 aa11.71□□□□□ -0.53
USE1-201ENST00000263897 C4orf46Q504U0 113 aa11.71□□□□□ -0.53
USE1-201ENST00000263897 SACSQ9NZJ4 4579 aa11.7□□□□□ -0.54
USE1-201ENST00000263897 PLA2G10O15496 165 aa11.7□□□□□ -0.54
USE1-201ENST00000263897 CFDP00746 253 aaPredicted RBP11.7□□□□□ -0.54
USE1-201ENST00000263897 NKX2-1P43699 371 aaPredicted RBP11.7□□□□□ -0.54
USE1-201ENST00000263897 POLR2GP62487 172 aaKnown RBP eCLIP11.7□□□□□ -0.54
USE1-201ENST00000263897 OR4D5Q8NGN0 318 aa11.7□□□□□ -0.54
USE1-201ENST00000263897 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
USE1-201ENST00000263897 FBXL17Q9UF56 701 aa11.7□□□□□ -0.54
USE1-201ENST00000263897 KLK5Q9Y337 293 aaPredicted RBP11.7□□□□□ -0.54
USE1-201ENST00000263897 H3BP45 60 aa11.69□□□□□ -0.54
USE1-201ENST00000263897 DEFB4AO15263 64 aa11.69□□□□□ -0.54
USE1-201ENST00000263897 C4BPBP20851 252 aa11.69□□□□□ -0.54
USE1-201ENST00000263897 CSNK1G2-AS1Q8NCQ2 148 aa11.69□□□□□ -0.54
USE1-201ENST00000263897 C11orf45Q8TAV5 145 aa11.69□□□□□ -0.54
USE1-201ENST00000263897 PPP1R14BQ96C90 147 aa11.69□□□□□ -0.54
USE1-201ENST00000263897 SMIM8Q96KF7 97 aa11.69□□□□□ -0.54
USE1-201ENST00000263897 PSENENQ9NZ42 101 aa11.69□□□□□ -0.54
USE1-201ENST00000263897 DNAH1Q9P2D7 4330 aa11.68□□□□□ -0.54
USE1-201ENST00000263897 H3BMM0 161 aa11.68□□□□□ -0.54
USE1-201ENST00000263897 NANOS2P60321 138 aaKnown RBP11.68□□□□□ -0.54
USE1-201ENST00000263897 TMEM144Q7Z5S9 345 aa11.68□□□□□ -0.54
USE1-201ENST00000263897 OR8I2Q8N0Y5 310 aa11.68□□□□□ -0.54
USE1-201ENST00000263897 Q8NAQ8 132 aa11.68□□□□□ -0.54
USE1-201ENST00000263897 MITD1Q8WV92 249 aa11.68□□□□□ -0.54
USE1-201ENST00000263897 WDR12Q9GZL7 423 aaKnown RBP11.68□□□□□ -0.54
USE1-201ENST00000263897 MFFQ9GZY8 342 aa11.68□□□□□ -0.54
USE1-201ENST00000263897 PMS2P5A8MQ11 134 aa11.67□□□□□ -0.54
USE1-201ENST00000263897 ZNF705EA8MWA4 302 aaPredicted RBP11.67□□□□□ -0.54
USE1-201ENST00000263897 LYRM1O43325 122 aa11.67□□□□□ -0.54
USE1-201ENST00000263897 GATA2P23769 480 aaPredicted RBP11.67□□□□□ -0.54
USE1-201ENST00000263897 ID1P41134 155 aa11.67□□□□□ -0.54
USE1-201ENST00000263897 PAX9P55771 341 aa11.67□□□□□ -0.54
USE1-201ENST00000263897 NUTF2P61970 127 aaKnown RBP11.67□□□□□ -0.54
USE1-201ENST00000263897 TMEM182Q6ZP80 229 aaPredicted RBP11.67□□□□□ -0.54
USE1-201ENST00000263897 ACOT7LQ6ZUV0 252 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms