RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 LINC00312Q9Y6C7 94 aa9.97□□□□□ -0.81
SMG6-201ENST00000263073 H7C1H1 209 aa9.96□□□□□ -0.81
SMG6-201ENST00000263073 YPEL1O60688 119 aa9.96□□□□□ -0.81
SMG6-201ENST00000263073 CHCHD1Q96BP2 118 aaKnown RBP9.96□□□□□ -0.81
SMG6-201ENST00000263073 YPEL2Q96QA6 119 aa9.96□□□□□ -0.81
SMG6-201ENST00000263073 A0A0G2JRQ6 117 aa9.96□□□□□ -0.81
SMG6-201ENST00000263073 A0A1B0GW15 77 aa9.96□□□□□ -0.82
SMG6-201ENST00000263073 STARD6P59095 220 aa9.96□□□□□ -0.82
SMG6-201ENST00000263073 ATP5L2Q7Z4Y8 100 aa9.96□□□□□ -0.82
SMG6-201ENST00000263073 FAM186AA6NE01 2351 aa9.96□□□□□ -0.82
SMG6-201ENST00000263073 GREB1Q4ZG55 1949 aa9.96□□□□□ -0.82
SMG6-201ENST00000263073 NBR2O15453 112 aa9.96□□□□□ -0.82
SMG6-201ENST00000263073 KLF17Q5JT82 389 aaPredicted RBP9.96□□□□□ -0.82
SMG6-201ENST00000263073 LHFPL1Q86WI0 220 aa9.96□□□□□ -0.82
SMG6-201ENST00000263073 SP9P0CG40 484 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 TDGF1P3P51864 188 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 ATP5IP56385 69 aaPredicted RBP9.95□□□□□ -0.82
SMG6-201ENST00000263073 ERVK11-1P61568 191 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 CYSLTR1Q9Y271 337 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 ESPL1Q14674 2120 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 PSPNO60542 156 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 PF4P02776 101 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 PRCDQ00LT1 54 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 NDPQ00604 133 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 RNF182Q8N6D2 247 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 RHOGP84095 191 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 TMEM42Q69YG0 159 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 TMEM242Q9NWH2 141 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 POLR3KQ9Y2Y1 108 aaPredicted RBP9.95□□□□□ -0.82
SMG6-201ENST00000263073 KIR3DS1Q14943 382 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 STPG4Q8N801 248 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 SPRR3Q9UBC9 169 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 SLC25A15Q9Y619 301 aa9.95□□□□□ -0.82
SMG6-201ENST00000263073 RBMY1BA6NDE4 496 aaKnown RBP9.94□□□□□ -0.82
SMG6-201ENST00000263073 RBMY1EA6NEQ0 496 aaKnown RBP9.94□□□□□ -0.82
SMG6-201ENST00000263073 C17orf100A8MU93 164 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 TIMM23O14925 209 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 RBMY1DP0C7P1 496 aaKnown RBP9.94□□□□□ -0.82
SMG6-201ENST00000263073 RBMY1A1P0DJD3 496 aaKnown RBP9.94□□□□□ -0.82
SMG6-201ENST00000263073 RBMY1CP0DJD4 496 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 NTF4P34130 210 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 HIST1H4AP62805 103 aaKnown RBP9.94□□□□□ -0.82
SMG6-201ENST00000263073 COLCA1Q6ZS62 124 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 KIF26BQ2KJY2 2108 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 IGHV1-18A0A0C4DH31 117 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 CEP290O15078 2479 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 LINC00271P0C7V0 271 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 PSG3Q16557 428 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 ZNF625Q96I27 306 aaPredicted RBP9.94□□□□□ -0.82
SMG6-201ENST00000263073 ESDP10768 282 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 FOXF2Q12947 444 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 KLRD1Q13241 179 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 SRSF6Q13247 344 aaKnown RBP9.94□□□□□ -0.82
SMG6-201ENST00000263073 C3orf36Q3SXR2 165 aa9.94□□□□□ -0.82
SMG6-201ENST00000263073 MALP21145 153 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 UBE2V1Q13404 147 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 LAGE3Q14657 143 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 TMEM30BQ3MIR4 351 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 PRSS57Q6UWY2 283 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 ZIC4Q8N9L1 334 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 C8orf46Q8TAG6 207 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 GAGE12BA1L429 117 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 LINC00473A8K010 186 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 SEC11AP67812 179 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 ZFAND6Q6FIF0 208 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 CFAP161Q6P656 301 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 ERG28Q9UKR5 140 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 NPSP0C0P6 89 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 TMEM219Q86XT9 240 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 NXT2Q9NPJ8 142 aaKnown RBP9.93□□□□□ -0.82
SMG6-201ENST00000263073 DOCK3Q8IZD9 2030 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 FREM3P0C091 2139 aa9.93□□□□□ -0.82
SMG6-201ENST00000263073 MST1LQ2TV78 715 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 TMEM249Q2WGJ8 235 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 GATD1Q8NB37 220 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 FBLN5Q9UBX5 448 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 M0R2P5 195 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 CRYGSP22914 178 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 NMSQ5H8A3 153 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 NABP1Q96AH0 204 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 TMEM133Q9H2Q1 129 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 C7orf69Q9H7B7 122 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 ZNRD1Q9P1U0 126 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 GAGE2BQ13066 116 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 GAGE2EQ4V326 116 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 GAGE2DQ9UEU5 116 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 TMEM8BA6NDV4 472 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 SYS1-DBNDD2H3BUS1 97 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 C20orf204Q6ZNR8 217 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 J3QW42 95 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 ABHD17AQ96GS6 310 aa9.92□□□□□ -0.82
SMG6-201ENST00000263073 ZNF48Q96MX3 618 aaPredicted RBP9.92□□□□□ -0.82
SMG6-201ENST00000263073 SLC25A39Q9BZJ4 359 aaPredicted RBP9.92□□□□□ -0.82
SMG6-201ENST00000263073 MRPL14Q6P1L8 145 aaKnown RBP9.91□□□□□ -0.82
SMG6-201ENST00000263073 Q6ZRM9 215 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 CD177Q8N6Q3 437 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 GFRA3O60609 400 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 SH2D1AO60880 128 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 ADAMTSL5Q6ZMM2 481 aa9.91□□□□□ -0.82
SMG6-201ENST00000263073 AMN1Q8IY45 258 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms