RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 PSMB11A5LHX3 300 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 BCL2P10415 239 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 PSMB3P49720 205 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 CRIP2P52943 208 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-201ENST00000258962 C19orf54Q5BKX5 351 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 SPATA31B1PQ5VZV4 182 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 A0A1B0GUS0 222 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 G3V318 75 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 NDUFA7O95182 113 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 IGLC1P0CG04 106 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 RHOBP62745 196 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 ICAM4Q14773 271 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 KLK9Q2XQG4 91 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 C16orf82Q7Z2V1 217 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 TMPRSS5Q9H3S3 457 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 SEPSECSQ9HD40 501 aaKnown RBP13.64□□□□□ -0.23
SRSF1-201ENST00000258962 KLK9Q9UKQ9 250 aa13.64□□□□□ -0.23
SRSF1-201ENST00000258962 M0QZK8 103 aa13.63□□□□□ -0.23
SRSF1-201ENST00000258962 SCO1O75880 301 aa13.63□□□□□ -0.23
SRSF1-201ENST00000258962 NDUFB8O95169 186 aa13.63□□□□□ -0.23
SRSF1-201ENST00000258962 SELENOTP62341 195 aa13.63□□□□□ -0.23
SRSF1-201ENST00000258962 AKIRIN2Q53H80 203 aa13.63□□□□□ -0.23
SRSF1-201ENST00000258962 SLC35E3Q7Z769 313 aa13.63□□□□□ -0.23
SRSF1-201ENST00000258962 SUN5Q8TC36 379 aa13.63□□□□□ -0.23
SRSF1-201ENST00000258962 RNF2Q99496 336 aa13.63□□□□□ -0.23
SRSF1-201ENST00000258962 OR2J3O76001 311 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 SRP19P09132 144 aaKnown RBP13.62□□□□□ -0.23
SRSF1-201ENST00000258962 OR5G3P0C626 314 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 STAG3L2P0CL84 134 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 STAG3L3P0CL85 134 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 BTN1A1Q13410 526 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 GUCA2BQ16661 112 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 RXFP4Q8TDU9 374 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 TMEM37Q8WXS4 190 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 TMEM68Q96MH6 324 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 TXNDC17Q9BRA2 123 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 S4R3C0 116 aa13.62□□□□□ -0.23
SRSF1-201ENST00000258962 F8W735 103 aaPredicted RBP13.61□□□□□ -0.23
SRSF1-201ENST00000258962 CLN5O75503 358 aa13.61□□□□□ -0.23
SRSF1-201ENST00000258962 CXorf1O96002 111 aa13.61□□□□□ -0.23
SRSF1-201ENST00000258962 C9orf152Q5JTZ5 239 aa13.61□□□□□ -0.23
SRSF1-201ENST00000258962 FAM78BQ5VT40 261 aa13.61□□□□□ -0.23
SRSF1-201ENST00000258962 Q6ZS46 218 aa13.61□□□□□ -0.23
SRSF1-201ENST00000258962 MIR17HGQ75NE6 70 aa13.61□□□□□ -0.23
SRSF1-201ENST00000258962 CLRN3Q8NCR9 226 aa13.61□□□□□ -0.23
SRSF1-201ENST00000258962 FUT9Q9Y231 359 aa13.61□□□□□ -0.23
SRSF1-201ENST00000258962 HAX1O00165 279 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 IGKV1-17P01599 117 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 IGHG2P01859 326 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 ARL14EPLP0DKL9 152 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 BLCAPP62952 87 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 TIGITQ495A1 244 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 PATE2Q6UY27 113 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 GATAD1Q8WUU5 269 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 NPFFR1Q9GZQ6 430 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 DOK5Q9P104 306 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 FBXL7Q9UJT9 491 aa13.6□□□□□ -0.23
SRSF1-201ENST00000258962 TRBV9A0A0B4J1U6 114 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 TRAV41A0A0B4J266 112 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 CLPSL1A2RUU4 121 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 IGF1P05019 195 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 HIST1H1BP16401 226 aaKnown RBP13.59□□□□□ -0.23
SRSF1-201ENST00000258962 MORN5Q5VZ52 161 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 Q6ZSV7 163 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 THYN1Q9P016 225 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 LINC00527Q9UJ94 153 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 COX7A2P2O60397 106 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 TAS2R45P59539 299 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 IQCF2Q8IXL9 164 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 DNAJC4Q9NNZ3 241 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 C21orf62Q9NYP8 219 aa13.59□□□□□ -0.23
SRSF1-201ENST00000258962 MFAP4P55083 255 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 RHOGP84095 191 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 MEF2BQ02080 365 aaPredicted RBP13.58□□□□□ -0.24
SRSF1-201ENST00000258962 RHEBQ15382 184 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 FAM74A3Q4VXF1 159 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 ATRAIDQ6UW56 229 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 OR1L4Q8NGR5 311 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 LINC01006Q8NI28 216 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 VN1R17PQ8TDU5 208 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 PFDN5Q99471 154 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 NIPSNAP3BQ9BS92 247 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 ZNF747Q9BV97 191 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 MRPL32Q9BYC8 188 aaKnown RBP13.58□□□□□ -0.24
SRSF1-201ENST00000258962 C16orf95Q9H693 158 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 RNF114Q9Y508 228 aa13.58□□□□□ -0.24
SRSF1-201ENST00000258962 TMEM250H0YL14 139 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 M0R036 132 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 IGHV3-23P01764 117 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 FABP1P07148 127 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 PSG1P11464 419 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 GCHFRP30047 84 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 NPBWR1P48145 328 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 PLP1P60201 277 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 C10orf113Q5VZT2 155 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 SHISA2Q6UWI4 295 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 ZNF503Q96F45 646 aa13.57□□□□□ -0.24
SRSF1-201ENST00000258962 FAM167A-AS1Q96KT0 104 aa13.56□□□□□ -0.24
SRSF1-201ENST00000258962 NOL4LQ96MY1 436 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-201ENST00000258962 UHRF2Q96PU4 802 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms