RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 TMEM200BQ69YZ2 307 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 TMEM136Q6ZRR5 245 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 SLC25A48Q6ZT89 311 aaKnown RBP3.86□□□□□ -1.79
USP44-201ENST00000258499 OR8B3Q8NGG8 313 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 TMEM191AQ9H0A3 160 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 ZNF257Q9Y2Q1 563 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 SELENOKQ9Y6D0 94 aa3.86□□□□□ -1.79
USP44-201ENST00000258499 TCRBV4S1A1TA0A5B7 111 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 H0YJW9 148 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 TM4SF5O14894 197 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 BTF3P20290 206 aaKnown RBP3.85□□□□□ -1.79
USP44-201ENST00000258499 NHLH1Q02575 133 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 MAJINQ3KP22 176 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 TPTE2P1Q5T6R2 138 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 FAM162BQ5T6X4 162 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 SP5Q6BEB4 398 aaPredicted RBP3.85□□□□□ -1.79
USP44-201ENST00000258499 UNQ5815/PRO19632Q6UWF5 114 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 LYPD2Q6UXB3 125 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 ZNF788Q6ZQV5 615 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 ZNF596Q8TC21 504 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 TSKUQ8WUA8 353 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 TMEM186Q96B77 213 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 GRAMD2BQ96HH9 432 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 GPR82Q96P67 336 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 VPS25Q9BRG1 176 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 CLEC7AQ9BXN2 247 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 LPAR2Q9HBW0 351 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 TPSG1Q9NRR2 321 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 EPDR1Q9UM22 224 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 ATRXP46100 2492 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.85□□□□□ -1.79
USP44-201ENST00000258499 OR4C46A6NHA9 309 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 GNG7O60262 68 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 FCGR2BP31994 310 aaPredicted RBP3.85□□□□□ -1.79
USP44-201ENST00000258499 MC5RP33032 325 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 CA7P43166 264 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 WT1-ASQ06250 92 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 RBPJQ06330 500 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 EIF4EBP1Q13541 118 aaPredicted RBP3.85□□□□□ -1.79
USP44-201ENST00000258499 Q6ZVH6 145 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 RBM14Q96PK6 669 aaKnown RBP3.85□□□□□ -1.79
USP44-201ENST00000258499 TMEM70Q9BUB7 260 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 MAP1LC3CQ9BXW4 147 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 Q9H3A6 140 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 AAMDCQ9H7C9 122 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 DKK4Q9UBT3 224 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 WDFY3Q8IZQ1 3526 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 MUC6Q6W4X9 2439 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 TMPRSS3P57727 454 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 ARF6P62330 175 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 OR10J3Q5JRS4 329 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 EXOC3-AS1Q8N2X6 119 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 MUC15Q8N387 334 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 C5orf17Q8NAS9 161 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 ZNF738Q8NE65 137 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 C11orf52Q96A22 123 aa3.85□□□□□ -1.79
USP44-201ENST00000258499 RPP21Q9H633 154 aaKnown RBP3.85□□□□□ -1.79
USP44-201ENST00000258499 FNDC4Q9H6D8 234 aaPredicted RBP3.85□□□□□ -1.79
USP44-201ENST00000258499 RALYQ9UKM9 306 aaKnown RBP3.85□□□□□ -1.79
USP44-201ENST00000258499 COL4A2P08572 1712 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 KIR2DL5BA0A0G2JN68 375 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 KIR2DL5BA0A0G2JPC4 375 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 MBD3L4A6NDZ8 208 aaPredicted RBP3.84□□□□□ -1.79
USP44-201ENST00000258499 MBD3L3A6NE82 208 aaPredicted RBP3.84□□□□□ -1.79
USP44-201ENST00000258499 MBD3L5A6NJ08 208 aaPredicted RBP3.84□□□□□ -1.79
USP44-201ENST00000258499 NUDT3O95989 172 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 IL4P05112 153 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 ATP5IP56385 69 aaPredicted RBP3.84□□□□□ -1.79
USP44-201ENST00000258499 Q0VG73 95 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 NIT1Q86X76 327 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 KIR2DL5AQ8N109 375 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 CIARTQ8N365 385 aaPredicted RBP3.84□□□□□ -1.79
USP44-201ENST00000258499 Q8N7P7 452 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 MBD3L2Q8NHZ7 208 aaPredicted RBP3.84□□□□□ -1.79
USP44-201ENST00000258499 C18orf32Q8TCD1 76 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 C20orf144Q9BQM9 153 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 LY96Q9Y6Y9 160 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 A0A1W2PPI3 338 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 E7EUB6 86 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 IGHV3-23P01764 117 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 CD3EP07766 207 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 UQCRFS1P47985 274 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 PCP4P48539 62 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 PNKDQ8N490 385 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 LINC01560Q8TB33 94 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 DDB2Q92466 427 aa3.84□□□□□ -1.79
USP44-201ENST00000258499 BOD1L1Q8NFC6 3051 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 IGF2RP11717 2491 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 IGHV1-69-2A0A0G2JMI3 117 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 hDV102S1A0JD36 115 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 FAM181BA6NEQ2 426 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 CNTFRP26992 372 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 LGALS7P47929 136 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 MEF2CQ06413 473 aaPredicted RBP3.84□□□□□ -1.8
USP44-201ENST00000258499 FOXC1Q12948 553 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 ADIPOQQ15848 244 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 TMEM249Q2WGJ8 235 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 KLF17Q5JT82 389 aaPredicted RBP3.84□□□□□ -1.8
USP44-201ENST00000258499 TEX43Q6ZNM6 134 aa3.84□□□□□ -1.8
USP44-201ENST00000258499 BPIFA4PQ86YQ2 179 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms