RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 C11orf42Q8N5U0 333 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 OR1L6Q8NGR2 347 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 SLC35E1Q96K37 410 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 CLEC7AQ9BXN2 247 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 RNASE7Q9H1E1 156 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 YTHDF2Q9Y5A9 579 aaKnown RBP11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 SELENOKQ9Y6D0 94 aa11.79□□□□□ -0.52
TRAFD1-201ENST00000257604 PDE6DO43924 150 aa11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 PRB1P04280 392 aa11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 PRRX1P54821 245 aa11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 RUSC1-AS1Q66K80 236 aa11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 LEMD1Q68G75 181 aa11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 OR5AN1Q8NGI8 311 aa11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 OSR1Q8TAX0 266 aaPredicted RBP11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 C1orf159Q96HA4 380 aa11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 NOTCH2Q04721 2471 aa11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 NAV2Q8IVL1 2488 aa11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 VAMP8Q9BV40 100 aa11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 MRPL36Q9P0J6 103 aaKnown RBP11.78□□□□□ -0.52
TRAFD1-201ENST00000257604 K7EN84 100 aa11.77□□□□□ -0.52
TRAFD1-201ENST00000257604 TIMM23O14925 209 aa11.77□□□□□ -0.52
TRAFD1-201ENST00000257604 DLEU1O43261 78 aa11.77□□□□□ -0.52
TRAFD1-201ENST00000257604 TPTE2P1Q5T6R2 138 aa11.77□□□□□ -0.52
TRAFD1-201ENST00000257604 OR52E5Q8NH55 327 aa11.77□□□□□ -0.52
TRAFD1-201ENST00000257604 BLNKQ8WV28 456 aa11.77□□□□□ -0.52
TRAFD1-201ENST00000257604 RNASE2P10153 161 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 MGST1P10620 155 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 TPPP2P59282 170 aa11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 C16orf54Q6UWD8 224 aa11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 DOPEY1Q5JWR5 2465 aa11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 ZANQ9Y493 2812 aa11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 A0A1W2PPI3 338 aa11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 GPR6P46095 362 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 FOXL1Q12952 345 aa11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 MORN5Q5VZ52 161 aa11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 LCN12Q6JVE5 192 aa11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 RNASE8Q8TDE3 154 aaKnown RBP11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 SSBP3Q9BWW4 388 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 FNDC4Q9H6D8 234 aaPredicted RBP11.77□□□□□ -0.53
TRAFD1-201ENST00000257604 IGHV3OR16-8A0A075B7F1 116 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 IGHV1-3A0A0C4DH29 117 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 IGHV3-35A0A0C4DH35 117 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 LINC00869P0C866 280 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 OR5AU1Q8NGC0 362 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 KCNIP2Q9NS61 270 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 NAT8BQ9UHF3 227 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 PYYP10082 97 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 USF1P22415 310 aaPredicted RBP11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 AMTP48728 403 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 RHOBP62745 196 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 SUMO1P63165 101 aaKnown RBP11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 LDLRAD2Q5SZI1 272 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 ZNF841Q6ZN19 808 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 OR1B1Q8NGR6 318 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 RCHY1Q96PM5 261 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 FBXL7Q9UJT9 491 aa11.76□□□□□ -0.53
TRAFD1-201ENST00000257604 LOC105371242A0A075B767 164 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 BUB1B-PAK6H3BSN5 160 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 OR5B3Q8NH48 314 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 SLC25A33Q9BSK2 321 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 BET1LQ9NYM9 111 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 SH2D7A6NKC9 451 aaPredicted RBP11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 IGHV3-23P01764 117 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 LIPFP07098 398 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 BRS3P32247 399 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 RPL27AP46776 148 aaKnown RBP11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 PRSS46E5RG02 174 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 ITGB1BP1O14713 200 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 GCHFRP30047 84 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 DLX6P56179 175 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 ST6GALNAC6Q969X2 333 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 NDUFA4L2Q9NRX3 87 aa11.75□□□□□ -0.53
TRAFD1-201ENST00000257604 RBP4P02753 201 aa11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 CRYBB3P26998 211 aa11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 VSTM2AQ8TAG5 236 aa11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 TNFRSF13BO14836 293 aaPredicted RBP11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 HINT1P49773 126 aaPredicted RBP11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 VWC2Q2TAL6 325 aa11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 LINC00479Q96M42 142 aa11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 TXN2Q99757 166 aa11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 NCOR1P1Q9H4R4 102 aa11.74□□□□□ -0.53
TRAFD1-201ENST00000257604 FAM90A9PA6NNJ1 464 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 CXorf1O96002 111 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 TMEM183BQ1AE95 376 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 TMEM177Q53S58 311 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 SIGLECL1Q8N7X8 197 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 GNB4Q9HAV0 340 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 KAAG1Q9UBP8 84 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 MPDU1O75352 247 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 CD99P14209 185 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 HTR1DP28221 377 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 CD69Q07108 199 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 FBLN7Q53RD9 439 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 PQLC2Q6ZP29 291 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 NRGNQ92686 78 aa11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 TBL2Q9Y4P3 447 aaKnown RBP11.73□□□□□ -0.53
TRAFD1-201ENST00000257604 CGB1A6NKQ9 187 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms