RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 IGHV3-35A0A0C4DH35 117 aa10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 CIDEAO60543 219 aa10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 IGKV1-13P0DP09 117 aa10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 ZNF506Q5JVG8 444 aa10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 SPXQ9BT56 116 aa10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 EIF3GO75821 320 aaKnown RBP eCLIP10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 OR10AG1Q8NH19 301 aa10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 CD24P25063 80 aa10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 PSG3Q16557 428 aa10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 PI4KAP42356 2102 aa10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 PSG1P11464 419 aa10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 SLC25A39Q9BZJ4 359 aaPredicted RBP10.84□□□□□ -0.67
PRPF38A-201ENST00000257181 FANCMQ8IYD8 2048 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 PCP4L1A6NKN8 68 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 SUMO2P61956 95 aaKnown RBP10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 RUNX1Q01196 453 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 KRTAP27-1Q3LI81 207 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 OR10J3Q5JRS4 329 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 NPBQ8NG41 125 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 RCC1LQ96I51 464 aaKnown RBP10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 PSG8Q9UQ74 426 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 SELLP14151 372 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 TCL1AP56279 114 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 LHFPL1Q86WI0 220 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 IL17RELQ6ZVW7 336 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 TOMM20LQ6UXN7 152 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 UBE2E2Q96LR5 201 aa10.83□□□□□ -0.68
PRPF38A-201ENST00000257181 IGHV3OR16-13A0A075B7E8 117 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 IGHV3-74A0A0B4J1X5 117 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 TNFRSF13BO14836 293 aaPredicted RBP10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 LHBP01229 141 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 UBE2CO00762 179 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 IFI27P40305 119 aaPredicted RBP10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 JOSD1Q15040 202 aaPredicted RBP10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 ORMDL2Q53FV1 153 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 ZNF841Q6ZN19 808 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 ARHGEF17Q96PE2 2063 aaPredicted RBP10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 RPL35AP18077 110 aaKnown RBP10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 POU2AF1Q16633 256 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 MRAP2Q96G30 205 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 ZNF98A6NK75 572 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 OVOL3O00110 214 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 IER3P46695 156 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 ACTL10Q5JWF8 245 aa10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 MRPL53Q96EL3 112 aaKnown RBP10.82□□□□□ -0.68
PRPF38A-201ENST00000257181 LY6HO94772 140 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 BATFQ16520 125 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 C17orf58Q2M2W7 97 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 PGLYRP4Q96LB8 373 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 COL5A1P20908 1838 aaPredicted RBP10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 CENPWQ5EE01 88 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 C9orf62Q8N4C0 152 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 HS3ST6Q96QI5 342 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 SHANK2-AS3Q9BTD1 123 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 CSN3P07498 182 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 CDX1P47902 265 aaPredicted RBP10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 MEIG1Q5JSS6 88 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 KIAA1549LQ6ZVL6 1849 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 C4orf3Q8WVX3 66 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 PMCHL2Q9BQD1 86 aa10.81□□□□□ -0.68
PRPF38A-201ENST00000257181 SPTA1P02549 2419 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 CENPVL3A0A0U1RRI6 287 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 M0R381 172 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 CCL20P78556 96 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 SRSF9Q13242 221 aaKnown RBP eCLIP10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 AJUBAQ96IF1 538 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 IGLV3-1P01715 115 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 IGFBPL1Q8WX77 278 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 TMEM37Q8WXS4 190 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 TECTAO75443 2155 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 QRFPP83859 136 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 TCF23Q7RTU1 214 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 ZNF329Q86UD4 541 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 A0A0A6YYD4 124 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 ADARB2-AS1A8MUL3 147 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 TCTEX1D4Q5JR98 221 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 S4R3C0 116 aa10.8□□□□□ -0.68
PRPF38A-201ENST00000257181 SPINK4O60575 86 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 RPL35P42766 123 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 FOXI2Q6ZQN5 318 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 WFDC12Q8WWY7 111 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 IGHV7-4-1A0A0J9YVY3 117 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 RBMY1BA6NDE4 496 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 RBMY1EA6NEQ0 496 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 RBMY1DP0C7P1 496 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 RBMY1A1P0DJD3 496 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 RBMY1CP0DJD4 496 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 AWAT1Q58HT5 328 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 TMEM50AO95807 157 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 VAMP3Q15836 100 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 Q6ZSR3 168 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 PUSL1Q8N0Z8 303 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 SFRP2Q96HF1 295 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 NXT2Q9NPJ8 142 aaKnown RBP10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 LINC00527Q9UJ94 153 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 ATP5L2Q7Z4Y8 100 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 MAPK1IP1LQ8NDC0 245 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 NUDT11Q96G61 164 aa10.79□□□□□ -0.68
PRPF38A-201ENST00000257181 TGIF2-C20orf24A0A0A6YYL0 155 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms