RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 DEFB4AO15263 64 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 PRAF2O60831 178 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 ZNF688P0C7X2 276 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 IGLC1P0CG04 106 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 SPP1P10451 314 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 TCTAP57738 103 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 YPEL3P61236 119 aaPredicted RBP15.35■□□□□ 0.05
NEDD8-201ENST00000250495 TMEM268Q5VZI3 342 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 TRPT1Q86TN4 253 aaKnown RBP15.35■□□□□ 0.05
NEDD8-201ENST00000250495 RPP25LQ8N5L8 163 aaKnown RBP15.35■□□□□ 0.05
NEDD8-201ENST00000250495 SLC24A4Q8NFF2 622 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 C2CD4CQ8TF44 421 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 DCANP1Q8TF63 244 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 ST6GAL2Q96JF0 529 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 PRRT1Q99946 306 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 KCNIP3Q9Y2W7 256 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 TMEM56-RWDD3S4R434 201 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 U3KQE9 123 aa15.35■□□□□ 0.05
NEDD8-201ENST00000250495 H2AFB2P0C5Z0 115 aa15.34■□□□□ 0.05
NEDD8-201ENST00000250495 OR10J1P30954 320 aa15.34■□□□□ 0.05
NEDD8-201ENST00000250495 RND2P52198 227 aa15.34■□□□□ 0.05
NEDD8-201ENST00000250495 RRAS2P62070 204 aaPredicted RBP15.34■□□□□ 0.05
NEDD8-201ENST00000250495 C20orf85Q9H1P6 137 aa15.34■□□□□ 0.05
NEDD8-201ENST00000250495 CCR6P51684 374 aa15.33■□□□□ 0.04
NEDD8-201ENST00000250495 DHRS2Q13268 280 aa15.33■□□□□ 0.04
NEDD8-201ENST00000250495 C16orf54Q6UWD8 224 aa15.33■□□□□ 0.04
NEDD8-201ENST00000250495 TCTE3Q8IZS6 198 aa15.33■□□□□ 0.04
NEDD8-201ENST00000250495 OR4C16Q8NGL9 310 aa15.33■□□□□ 0.04
NEDD8-201ENST00000250495 SCGB3A2Q96PL1 93 aa15.33■□□□□ 0.04
NEDD8-201ENST00000250495 HRH4Q9H3N8 390 aa15.33■□□□□ 0.04
NEDD8-201ENST00000250495 KNCNA6PVL3 124 aa15.32■□□□□ 0.04
NEDD8-201ENST00000250495 C11orf94C9JXX5 98 aa15.32■□□□□ 0.04
NEDD8-201ENST00000250495 NDUFB6O95139 128 aa15.32■□□□□ 0.04
NEDD8-201ENST00000250495 GIG44P09565 113 aaPredicted RBP15.32■□□□□ 0.04
NEDD8-201ENST00000250495 MIFP14174 115 aa15.32■□□□□ 0.04
NEDD8-201ENST00000250495 Q8NAQ8 132 aa15.32■□□□□ 0.04
NEDD8-201ENST00000250495 IL22RA2Q969J5 263 aa15.32■□□□□ 0.04
NEDD8-201ENST00000250495 TRAV6A0A075B6T7 132 aa15.31■□□□□ 0.04
NEDD8-201ENST00000250495 DEDDO75618 318 aa15.31■□□□□ 0.04
NEDD8-201ENST00000250495 SULT1A3P0DMM9 295 aa15.31■□□□□ 0.04
NEDD8-201ENST00000250495 SULT1A4P0DMN0 295 aa15.31■□□□□ 0.04
NEDD8-201ENST00000250495 NPY1RP25929 384 aa15.31■□□□□ 0.04
NEDD8-201ENST00000250495 ACTL10Q5JWF8 245 aa15.31■□□□□ 0.04
NEDD8-201ENST00000250495 OR51S1Q8NGJ8 323 aa15.31■□□□□ 0.04
NEDD8-201ENST00000250495 SCP2D1Q9UJQ7 156 aa15.31■□□□□ 0.04
NEDD8-201ENST00000250495 IL4P05112 153 aa15.3■□□□□ 0.04
NEDD8-201ENST00000250495 NMSQ5H8A3 153 aa15.3■□□□□ 0.04
NEDD8-201ENST00000250495 TMEM170AQ8WVE7 144 aa15.3■□□□□ 0.04
NEDD8-201ENST00000250495 GLMPQ8WWB7 406 aa15.3■□□□□ 0.04
NEDD8-201ENST00000250495 NPIPB3Q92617 1050 aa15.3■□□□□ 0.04
NEDD8-201ENST00000250495 RAB40CQ96S21 281 aa15.3■□□□□ 0.04
NEDD8-201ENST00000250495 U3KQ87 197 aa15.3■□□□□ 0.04
NEDD8-201ENST00000250495 IGHV4-28A0A0C4DH34 117 aa15.29■□□□□ 0.04
NEDD8-201ENST00000250495 ZNF705EA8MWA4 302 aaPredicted RBP15.29■□□□□ 0.04
NEDD8-201ENST00000250495 TOMM40O96008 361 aa15.29■□□□□ 0.04
NEDD8-201ENST00000250495 IFNA10P01566 189 aa15.29■□□□□ 0.04
NEDD8-201ENST00000250495 IL5P05113 134 aa15.29■□□□□ 0.04
NEDD8-201ENST00000250495 RD3LP0DJH9 198 aa15.29■□□□□ 0.04
NEDD8-201ENST00000250495 ZFP69Q49AA0 526 aa15.29■□□□□ 0.04
NEDD8-201ENST00000250495 PSMG4Q5JS54 123 aa15.29■□□□□ 0.04
NEDD8-201ENST00000250495 ACY3Q96HD9 319 aa15.29■□□□□ 0.04
NEDD8-201ENST00000250495 SEPSECSQ9HD40 501 aaKnown RBP15.29■□□□□ 0.04
NEDD8-201ENST00000250495 MCUBQ9NWR8 336 aa15.29■□□□□ 0.04
NEDD8-201ENST00000250495 NXPH3O95157 252 aa15.28■□□□□ 0.04
NEDD8-201ENST00000250495 RBMY1A1P0DJD3 496 aaKnown RBP15.28■□□□□ 0.04
NEDD8-201ENST00000250495 RBMY1CP0DJD4 496 aa15.28■□□□□ 0.04
NEDD8-201ENST00000250495 C4BPBP20851 252 aa15.28■□□□□ 0.04
NEDD8-201ENST00000250495 SNRPD3P62318 126 aaKnown RBP15.28■□□□□ 0.04
NEDD8-201ENST00000250495 RBMY1FQ15415 496 aaKnown RBP15.28■□□□□ 0.04
NEDD8-201ENST00000250495 USF2Q15853 346 aaPredicted RBP15.28■□□□□ 0.04
NEDD8-201ENST00000250495 MED28Q9H204 178 aa15.28■□□□□ 0.04
NEDD8-201ENST00000250495 A0A0B4J2A0 478 aa15.27■□□□□ 0.04
NEDD8-201ENST00000250495 IGLL5B9A064 214 aa15.27■□□□□ 0.04
NEDD8-201ENST00000250495 BUB3O43684 328 aa15.27■□□□□ 0.04
NEDD8-201ENST00000250495 NUTF2P61970 127 aaKnown RBP15.27■□□□□ 0.04
NEDD8-201ENST00000250495 ZBTB8BQ8NAP8 495 aaPredicted RBP15.27■□□□□ 0.04
NEDD8-201ENST00000250495 NRN1Q9NPD7 142 aa15.27■□□□□ 0.04
NEDD8-201ENST00000250495 SHPKQ9UHJ6 478 aa15.27■□□□□ 0.04
NEDD8-201ENST00000250495 PFDN2Q9UHV9 154 aa15.27■□□□□ 0.04
NEDD8-201ENST00000250495 X6R8D5 127 aa15.27■□□□□ 0.04
NEDD8-201ENST00000250495 SNRPGP15A8MWD9 76 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 PSG1P11464 419 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 ANXA3P12429 323 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 HLA-DMBP28068 263 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 ATP5IP56385 69 aaPredicted RBP15.26■□□□□ 0.03
NEDD8-201ENST00000250495 SMCO1Q147U7 214 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 SIGLEC15Q6ZMC9 328 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 LGI3Q8N145 548 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 CSNK1G2-AS1Q8NCQ2 148 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 DTD1Q8TEA8 209 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 SLC25A21Q9BQT8 299 aaPredicted RBP15.26■□□□□ 0.03
NEDD8-201ENST00000250495 C1QTNF4Q9BXJ3 329 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 CLEC5AQ9NY25 188 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 HSPB7Q9UBY9 170 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 APLNQ9ULZ1 77 aa15.26■□□□□ 0.03
NEDD8-201ENST00000250495 PIGBOS1A0A0B4J2F0 54 aa15.25■□□□□ 0.03
NEDD8-201ENST00000250495 FAM90A26D6RGX4 464 aa15.25■□□□□ 0.03
NEDD8-201ENST00000250495 C1QBP02746 253 aa15.25■□□□□ 0.03
NEDD8-201ENST00000250495 AKR1C4P17516 323 aa15.25■□□□□ 0.03
NEDD8-201ENST00000250495 OR51G1Q8NGK1 321 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms