RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 C9JCJ5 164 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 PEAR1Q5VY43 1037 aaPredicted RBP9.51□□□□□ -0.89
SOX9-201ENST00000245479 Q6ZT83 130 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 TMEM116Q8NCL8 245 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 C10orf142B7Z368 130 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 OR9G9P0C7N8 305 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 HES1Q14469 280 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 SRSF7Q16629 238 aaKnown RBP eCLIP9.51□□□□□ -0.89
SOX9-201ENST00000245479 LRRC10Q5BKY1 277 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 SFXN3Q9BWM7 321 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 ZNF292O60281 2723 aa9.51□□□□□ -0.89
SOX9-201ENST00000245479 IGHV3OR16-8A0A075B7F1 116 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 A0A1W2PRE2 83 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 APOHP02749 345 aaPredicted RBP9.5□□□□□ -0.89
SOX9-201ENST00000245479 RAB1CQ92928 201 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 COQ2Q96H96 371 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 KIAA1549Q9HCM3 1950 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 PEX7O00628 323 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 SCGB2A1O75556 95 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 SCGB1C2P0DMR2 95 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 ACP7Q6ZNF0 438 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 SRSF12Q8WXF0 261 aaKnown RBP9.5□□□□□ -0.89
SOX9-201ENST00000245479 GTSF1LQ9H1H1 148 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 PRRG2O14669 202 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 PSG9Q00887 426 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 C10orf55Q5SWW7 151 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 Q6ZS49 121 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 CD177Q8N6Q3 437 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 OR1L8Q8NGR8 309 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 MGST2Q99735 147 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 SMIM13P0DJ93 91 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 SLC35E4Q6ICL7 350 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 ZNF497Q6ZNH5 498 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 TMEM136Q6ZRR5 245 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 OR4F17Q8NGA8 305 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 C18orf32Q8TCD1 76 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 RNF138Q8WVD3 245 aa9.5□□□□□ -0.89
SOX9-201ENST00000245479 C15orf62A8K5M9 175 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 Q6P435 159 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 INO80CQ6PI98 192 aaPredicted RBP9.49□□□□□ -0.89
SOX9-201ENST00000245479 FOXL2NBQ6ZUU3 175 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 IGHV1-18A0A0C4DH31 117 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 SH2D7A6NKC9 451 aaPredicted RBP9.49□□□□□ -0.89
SOX9-201ENST00000245479 NPPCP23582 126 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 VMA21Q3ZAQ7 101 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 LINC00470Q9BZP3 86 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 IGKV3D-15A0A087WSY6 115 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 PRR30Q53SZ7 412 aaPredicted RBP9.49□□□□□ -0.89
SOX9-201ENST00000245479 OR10W1Q8NGF6 305 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 NPIPB3Q92617 1050 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 TMEM186Q96B77 213 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 ASCL2Q99929 193 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 AAMDCQ9H7C9 122 aa9.49□□□□□ -0.89
SOX9-201ENST00000245479 MRPL27Q9P0M9 148 aaKnown RBP9.49□□□□□ -0.89
SOX9-201ENST00000245479 IGHV2-26A0A0B4J1V2 119 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 SEC11AP67812 179 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 COLCA1Q6ZS62 124 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 NEUROG1Q92886 237 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 C5orf30Q96GV9 206 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 SIGMAR1Q99720 223 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 C19orf24Q9BVV8 132 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 IGHV2-70DA0A0C4DH43 119 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 NDUFS8O00217 210 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 CD5LO43866 347 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 MDS2Q8NDY4 140 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 LINC01560Q8TB33 94 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 ZNF257Q9Y2Q1 563 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 SYS1-DBNDD2H3BUS1 97 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 MGST3O14880 152 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 PYYP10082 97 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 GNG5P63218 68 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 WFDC3Q8IUB2 231 aa9.48□□□□□ -0.89
SOX9-201ENST00000245479 SVEP1Q4LDE5 3571 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 ZNF138P52744 262 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 CLEC2AQ6UVW9 174 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 TMEM144Q7Z5S9 345 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 ABHD17AQ96GS6 310 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 ZNF414Q96IQ9 312 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 C18orf15Q96N68 181 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 CALYQ9NYX4 217 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 LRRK2Q5S007 2527 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 NDFIP1Q9BT67 221 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 RPP21Q9H633 154 aaKnown RBP9.47□□□□□ -0.89
SOX9-201ENST00000245479 PRR33A8MZF0 331 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 TMEM238C9JI98 176 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 MMP23AO75900 390 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 AREGP15514 252 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 CKS2P33552 79 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 OR1N2Q8NGR9 330 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 LINC00479Q96M42 142 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 MRPL32Q9BYC8 188 aaKnown RBP9.47□□□□□ -0.89
SOX9-201ENST00000245479 LY96Q9Y6Y9 160 aa9.47□□□□□ -0.89
SOX9-201ENST00000245479 A0A0G2JLM5 398 aa9.46□□□□□ -0.89
SOX9-201ENST00000245479 LOC107984156A0A0G2JMH3 177 aa9.46□□□□□ -0.89
SOX9-201ENST00000245479 PAX2Q02962 417 aa9.46□□□□□ -0.89
SOX9-201ENST00000245479 SLAQ13239 276 aa9.46□□□□□ -0.89
SOX9-201ENST00000245479 SCGB1D4Q6XE38 83 aa9.46□□□□□ -0.89
SOX9-201ENST00000245479 C22orf34Q6ZV56 151 aa9.46□□□□□ -0.89
SOX9-201ENST00000245479 ARL17AQ8IVW1 177 aa9.46□□□□□ -0.89
SOX9-201ENST00000245479 VSTM2AQ8TAG5 236 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms