RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 POLR3KQ9Y2Y1 108 aaPredicted RBP11.5□□□□□ -0.57
TARDBP-201ENST00000240185 PCOLCEQ15113 449 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 ETDBQ3ZM63 59 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 CCL3L1P16619 93 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 TMEM158Q8WZ71 300 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 C20orf144Q9BQM9 153 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 IGKV1D-8A0A087WSZ0 117 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 MORN2Q502X0 79 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 RASL10AQ92737 203 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 H3BMM0 161 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 COX6B1P14854 86 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 APOBEC3AP31941 199 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-201ENST00000240185 STHQ8IWL8 128 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 UBE2WQ96B02 151 aa11.49□□□□□ -0.57
TARDBP-201ENST00000240185 SCN2AQ99250 2005 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 INS-IGF2F8WCM5 200 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 INSP01308 110 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 ATP6V0BQ99437 205 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 IGKV2-40A0A087WW87 121 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-201ENST00000240185 IGKV2D-40P01614 121 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-201ENST00000240185 FAM90A1Q86YD7 464 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 DOCK10Q96BY6 2186 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 A0A087WV48 116 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 IGKV1-9A0A0C4DH69 117 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 PMS2P5A8MQ11 134 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 LEPROTO15243 131 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 STPG4Q8N801 248 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 ANAPC10Q9UM13 185 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 PAQR4Q8N4S7 273 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-201ENST00000240185 WFDC12Q8WWY7 111 aa11.48□□□□□ -0.57
TARDBP-201ENST00000240185 CSRP3P50461 194 aa11.47□□□□□ -0.57
TARDBP-201ENST00000240185 DUTP33316 252 aaKnown RBP11.47□□□□□ -0.57
TARDBP-201ENST00000240185 RFPL3SP0C7P2 107 aa11.47□□□□□ -0.57
TARDBP-201ENST00000240185 IFITM1P13164 125 aa11.47□□□□□ -0.57
TARDBP-201ENST00000240185 ZNF497Q6ZNH5 498 aa11.47□□□□□ -0.57
TARDBP-201ENST00000240185 PPDPFLQ8WWR9 84 aa11.47□□□□□ -0.57
TARDBP-201ENST00000240185 PEMTQ9UBM1 199 aa11.47□□□□□ -0.57
TARDBP-201ENST00000240185 OTOFQ9HC10 1997 aa11.47□□□□□ -0.57
TARDBP-201ENST00000240185 HGFACQ04756 655 aa11.47□□□□□ -0.57
TARDBP-201ENST00000240185 ZIC4Q8N9L1 334 aa11.47□□□□□ -0.57
TARDBP-201ENST00000240185 ZNF837Q96EG3 531 aaPredicted RBP11.47□□□□□ -0.57
TARDBP-201ENST00000240185 LY75O60449 1722 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 OVOL1O14753 267 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 SCN8AQ9UQD0 1980 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 FAM90A9PA6NNJ1 464 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 NRN1LQ496H8 165 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 RFNGQ9Y644 331 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 LY96Q9Y6Y9 160 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 MYMXA0A1B0GTQ4 84 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 K7EP13 123 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 SLAQ13239 276 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 WBP1Q96G27 269 aa11.46□□□□□ -0.57
TARDBP-201ENST00000240185 F8WEM9 126 aa11.46□□□□□ -0.58
TARDBP-201ENST00000240185 VCYO14598 125 aa11.46□□□□□ -0.58
TARDBP-201ENST00000240185 INAFM2P0DMQ5 153 aa11.46□□□□□ -0.58
TARDBP-201ENST00000240185 UCNP55089 124 aa11.46□□□□□ -0.58
TARDBP-201ENST00000240185 ZNF474Q6S9Z5 364 aaPredicted RBP11.46□□□□□ -0.58
TARDBP-201ENST00000240185 DOCK9Q9BZ29 2069 aa11.46□□□□□ -0.58
TARDBP-201ENST00000240185 TRACP01848 142 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 SLC25A45Q8N413 288 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 RPL32P62910 135 aaKnown RBP11.45□□□□□ -0.58
TARDBP-201ENST00000240185 LINC01560Q8TB33 94 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 SLC25A39Q9BZJ4 359 aaPredicted RBP11.45□□□□□ -0.58
TARDBP-201ENST00000240185 UBR3Q6ZT12 1888 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 A0A0A6YYD4 124 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 IQCF6A8MYZ5 107 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 SOCS3O14543 225 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 SUPT4H1P63272 117 aaKnown RBP11.45□□□□□ -0.58
TARDBP-201ENST00000240185 A0A087WX48 190 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 IGHV2OR16-5A0A0B4J2B6 119 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 CDKN1AP38936 164 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 LINC00114Q6XXX2 140 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 NABP1Q96AH0 204 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 TIMM21Q9BVV7 248 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 TRBV20-1A0A075B6N2 111 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 CD24P25063 80 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 PRB3Q04118 309 aaPredicted RBP11.45□□□□□ -0.58
TARDBP-201ENST00000240185 FAM27E3Q08E93 113 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 C6orf226Q5I0X4 101 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 PRIMA1Q86XR5 153 aa11.45□□□□□ -0.58
TARDBP-201ENST00000240185 C9orf118A6NHY6 69 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 ADCYAP1P18509 176 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 DPH3P1Q9H4G8 78 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 CT83Q5H943 113 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 GFI1Q99684 422 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 CSTL1Q9H114 145 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 CHCHD2Q9Y6H1 151 aaPredicted RBP11.44□□□□□ -0.58
TARDBP-201ENST00000240185 VGLL1Q99990 258 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 SBF2Q86WG5 1849 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 IGHV3-73A0A0B4J1V6 119 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 LHFPL1Q86WI0 220 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 SPXQ9BT56 116 aa11.44□□□□□ -0.58
TARDBP-201ENST00000240185 TRAV40A0A0B4J280 105 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 CELA3AP09093 270 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 SELLP14151 372 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 GAGE12HA6NDE8 117 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 SMKR1H3BMG3 65 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 C1orf159Q96HA4 380 aa11.43□□□□□ -0.58
TARDBP-201ENST00000240185 F8W1H4 67 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms