RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SPRNQ5BIV9 151 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 PLSCR4Q9NRQ2 329 aa11.53□□□□□ -0.56
PCDHB3-201ENST00000231130 TMEM265A0A087WTH1 108 aa11.52□□□□□ -0.56
PCDHB3-201ENST00000231130 H3BRM9 83 aa11.52□□□□□ -0.56
PCDHB3-201ENST00000231130 SPRY3O43610 288 aa11.52□□□□□ -0.56
PCDHB3-201ENST00000231130 REG1BP48304 166 aa11.52□□□□□ -0.56
PCDHB3-201ENST00000231130 SPRR3Q9UBC9 169 aa11.52□□□□□ -0.56
PCDHB3-201ENST00000231130 IGHV3-21A0A0B4J1V1 117 aa11.52□□□□□ -0.57
PCDHB3-201ENST00000231130 C15orf61A6NNL5 157 aa11.52□□□□□ -0.57
PCDHB3-201ENST00000231130 F2RL2O00254 374 aa11.52□□□□□ -0.57
PCDHB3-201ENST00000231130 SAA2P0DJI9 122 aaPredicted RBP11.52□□□□□ -0.57
PCDHB3-201ENST00000231130 SAMD5Q5TGI4 173 aa11.52□□□□□ -0.57
PCDHB3-201ENST00000231130 NEGR1Q7Z3B1 354 aa11.52□□□□□ -0.57
PCDHB3-201ENST00000231130 UBALD2Q8IYN6 164 aa11.52□□□□□ -0.57
PCDHB3-201ENST00000231130 C11orf52Q96A22 123 aa11.52□□□□□ -0.57
PCDHB3-201ENST00000231130 IFI27L2Q9H2X8 130 aa11.52□□□□□ -0.57
PCDHB3-201ENST00000231130 LY96Q9Y6Y9 160 aa11.52□□□□□ -0.57
PCDHB3-201ENST00000231130 A1L4Q6 167 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 KLK10O43240 276 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 IGKV1-16P04430 117 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 SP1P08047 785 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 TMEM249Q2WGJ8 235 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 CD300EQ496F6 205 aaPredicted RBP11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 MOGAT3Q86VF5 341 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 AMMECR1Q9Y4X0 333 aaPredicted RBP11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 LIPFP07098 398 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 FAM162BQ5T6X4 162 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 OR5A1Q8NGJ0 315 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 ADTRPQ96IZ2 230 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 TPPP3Q9BW30 176 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 IGKV1D-17A0A075B6S4 117 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 A0A1W2PPM0 123 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 COX8AP10176 69 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 SSBP2P81877 361 aaPredicted RBP11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 ETDBQ3ZM63 59 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 SH2D6Q7Z4S9 175 aa11.51□□□□□ -0.57
PCDHB3-201ENST00000231130 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 KLRC4-KLRK1H3BQV0 150 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 IGLV2-8P01709 118 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 TAS2R45P59539 299 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 PRR20EP86478 221 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 PRR20CP86479 221 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 PRR20DP86480 221 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 PRR20BP86481 221 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 PRR20AP86496 221 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 ATP5G2Q06055 141 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 CT45A1Q5HYN5 189 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 CT45A3Q8NHU0 189 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 TMUB1Q9BVT8 246 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 C19orf24Q9BVV8 132 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 MS4A6AQ9H2W1 248 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 CALYQ9NYX4 217 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 WNK2Q9Y3S1 2297 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 K7EMI3 77 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 FXYD7P58549 80 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 IDI2-AS1Q9NZ38 188 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 TEX50A0A1B0GTY4 177 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 FTH1P19P0C7X4 201 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 ORM2P19652 201 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 C2orf91Q6ZV80 131 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 WDR31Q8NA23 367 aa11.5□□□□□ -0.57
PCDHB3-201ENST00000231130 CECR9P0C854 216 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 C8orf88P0DMB2 117 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 TMEM177Q53S58 311 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 FA2HQ7L5A8 372 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 PRSS3P2Q8NHM4 247 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 URB1-AS1Q96HZ7 61 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 ASCL2Q99929 193 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 SS18L2Q9UHA2 77 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 KLF13Q9Y2Y9 288 aaPredicted RBP11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 LOC389332A0A1B0GUA5 103 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 COX7A2P2O60397 106 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 WFDC2Q14508 124 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 CCDC144NLQ6NUI1 221 aa11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 NEU4Q8WWR8 484 aaPredicted RBP11.49□□□□□ -0.57
PCDHB3-201ENST00000231130 H1FXQ92522 213 aaKnown RBP11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 DAZAP1Q96EP5 407 aaKnown RBP11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 TNRC6BQ9UPQ9 1833 aaKnown RBP11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 SERTM2A0A1B0GWG4 89 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 PSMB11A5LHX3 300 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 SRRM4A7MD48 611 aaKnown RBP11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 KALRNO60229 2985 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 HBBP68871 147 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 C10orf55Q5SWW7 151 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 PCSK5Q92824 1860 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 CACNA1BQ00975 2339 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 FCGR2BP31994 310 aaPredicted RBP11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 TMPRSS3P57727 454 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 WFDC3Q8IUB2 231 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 GRAMD2BQ96HH9 432 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 SLC25A33Q9BSK2 321 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 JPT1Q9UK76 154 aa11.48□□□□□ -0.57
PCDHB3-201ENST00000231130 TACC2O95359 2948 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 K7ERJ3 54 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 SLC25A5P05141 298 aaKnown RBP11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 SMIM13P0DJ93 91 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 LOXL3P58215 753 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 PPP1R35Q8TAP8 253 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 DSCAMO60469 2012 aa11.47□□□□□ -0.57
PCDHB3-201ENST00000231130 SMIM17P0DL12 118 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms