RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 IGHV3-72A0A0B4J1Y9 119 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 MFAP2P55001 183 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 SAPCD1Q5SSQ6 148 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 SSX8Q7RTT4 187 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 NUP35Q8NFH5 326 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 STXBP6Q8NFX7 210 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 OR4B1Q8NGF8 309 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 NDUFB8O95169 186 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 CTRLP40313 264 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 HCP5Q6MZN7 132 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 ZNF841Q6ZN19 808 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 C18orf32Q8TCD1 76 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 TRGV9Q99603 122 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 CHRDL1Q9BU40 450 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 TMEM133Q9H2Q1 129 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 DYNLRB1Q9NP97 96 aa13.05□□□□□ -0.32
LTBR-201ENST00000228918 VSTM5A8MXK1 200 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 ENSAO43768 121 aaKnown RBP13.04□□□□□ -0.32
LTBR-201ENST00000228918 ORM2P19652 201 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 MMDQ15546 238 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 GDF5OSQ5U4N7 250 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 PRR27Q6MZM9 219 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 NIT1Q86X76 327 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 TEX45Q8NA69 505 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 OR1B1Q8NGR6 318 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 RNASE8Q8TDE3 154 aaKnown RBP13.04□□□□□ -0.32
LTBR-201ENST00000228918 TSKUQ8WUA8 353 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 MRPL27Q9P0M9 148 aaKnown RBP13.04□□□□□ -0.32
LTBR-201ENST00000228918 EPDR1Q9UM22 224 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 SHISA9B4DS77 424 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 RPL27AP46776 148 aaKnown RBP13.04□□□□□ -0.32
LTBR-201ENST00000228918 UBE2G1P62253 170 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 STPG4Q8N801 248 aa13.04□□□□□ -0.32
LTBR-201ENST00000228918 C20orf202A1L168 122 aa13.03□□□□□ -0.32
LTBR-201ENST00000228918 E7EQL1 145 aa13.03□□□□□ -0.32
LTBR-201ENST00000228918 SLC25A5P05141 298 aaKnown RBP13.03□□□□□ -0.32
LTBR-201ENST00000228918 HIST1H1EP10412 219 aaKnown RBP13.03□□□□□ -0.32
LTBR-201ENST00000228918 COTL1Q14019 142 aa13.03□□□□□ -0.32
LTBR-201ENST00000228918 C19orf35Q6ZS72 473 aa13.03□□□□□ -0.32
LTBR-201ENST00000228918 SPACA3Q8IXA5 215 aa13.03□□□□□ -0.32
LTBR-201ENST00000228918 Q8NA96 180 aa13.03□□□□□ -0.32
LTBR-201ENST00000228918 ORAOV1Q8WV07 137 aa13.03□□□□□ -0.32
LTBR-201ENST00000228918 BLNKQ8WV28 456 aa13.03□□□□□ -0.32
LTBR-201ENST00000228918 C22orf15Q8WYQ4 148 aa13.03□□□□□ -0.32
LTBR-201ENST00000228918 ABHD17AQ96GS6 310 aa13.03□□□□□ -0.32
LTBR-201ENST00000228918 CCL25O15444 150 aa13.02□□□□□ -0.32
LTBR-201ENST00000228918 CRYGBP07316 175 aa13.02□□□□□ -0.32
LTBR-201ENST00000228918 TNXAQ16473 311 aa13.02□□□□□ -0.32
LTBR-201ENST00000228918 GFRALQ6UXV0 394 aa13.02□□□□□ -0.32
LTBR-201ENST00000228918 TMEM116Q8NCL8 245 aa13.02□□□□□ -0.32
LTBR-201ENST00000228918 SMIM12Q96EX1 92 aa13.02□□□□□ -0.32
LTBR-201ENST00000228918 KLF12Q9Y4X4 402 aa13.02□□□□□ -0.32
LTBR-201ENST00000228918 MALRD1Q5VYJ5 2156 aa13.02□□□□□ -0.33
LTBR-201ENST00000228918 CORTO00230 105 aa13.02□□□□□ -0.33
LTBR-201ENST00000228918 CNTFRP26992 372 aa13.02□□□□□ -0.33
LTBR-201ENST00000228918 ACACAQ13085 2346 aa13.02□□□□□ -0.33
LTBR-201ENST00000228918 PGPA6NDG6 321 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 HIGD1CA8MV81 97 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 C3orf79P0CE67 100 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 GP9P14770 177 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 PAX2Q02962 417 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 LEMD1Q68G75 181 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 LHFPL4Q7Z7J7 247 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 FAM19A2Q8N3H0 131 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 TNFRSF14Q92956 283 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 IGHV1-69-2A0A0G2JMI3 117 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 NBEAP1P0C6P0 100 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 APELAP0DMC3 54 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 PRRX1P54821 245 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 PRSS33Q8NF86 280 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 SGK494Q96LW2 274 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 MLST8Q9BVC4 326 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 UQCR10Q9UDW1 63 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 ZNF835Q9Y2P0 537 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 SIGLEC9Q9Y336 463 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 ATMQ13315 3056 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 ADGRG4Q8IZF6 3080 aa13.01□□□□□ -0.33
LTBR-201ENST00000228918 IGHV2-26A0A0B4J1V2 119 aa13□□□□□ -0.33
LTBR-201ENST00000228918 A0A1B0GXF2 115 aa13□□□□□ -0.33
LTBR-201ENST00000228918 HYPMO75409 117 aa13□□□□□ -0.33
LTBR-201ENST00000228918 OR2J3O76001 311 aa13□□□□□ -0.33
LTBR-201ENST00000228918 IGLV1-47P01700 117 aa13□□□□□ -0.33
LTBR-201ENST00000228918 KLF5Q13887 457 aaPredicted RBP13□□□□□ -0.33
LTBR-201ENST00000228918 ATP5L2Q7Z4Y8 100 aa13□□□□□ -0.33
LTBR-201ENST00000228918 GPR82Q96P67 336 aa13□□□□□ -0.33
LTBR-201ENST00000228918 IGHV3-21A0A0B4J1V1 117 aa13□□□□□ -0.33
LTBR-201ENST00000228918 VWC2LB2RUY7 222 aa13□□□□□ -0.33
LTBR-201ENST00000228918 K7EP13 123 aa13□□□□□ -0.33
LTBR-201ENST00000228918 NTF3P20783 257 aa13□□□□□ -0.33
LTBR-201ENST00000228918 CA7P43166 264 aa13□□□□□ -0.33
LTBR-201ENST00000228918 PTTG1IPP53801 180 aa13□□□□□ -0.33
LTBR-201ENST00000228918 DLX1P56177 255 aa13□□□□□ -0.33
LTBR-201ENST00000228918 PLP1P60201 277 aa13□□□□□ -0.33
LTBR-201ENST00000228918 SPATA45Q537H7 98 aa13□□□□□ -0.33
LTBR-201ENST00000228918 NGBQ9NPG2 151 aa13□□□□□ -0.33
LTBR-201ENST00000228918 RPH3ALQ9UNE2 315 aa13□□□□□ -0.33
LTBR-201ENST00000228918 IGLC2P0DOY2 106 aa12.99□□□□□ -0.33
LTBR-201ENST00000228918 IGLC3P0DOY3 106 aa12.99□□□□□ -0.33
LTBR-201ENST00000228918 CDKN1BP46527 198 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms