RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 PUS1Q9Y606 427 aaKnown RBP eCLIP10.09□□□□□ -0.79
TIMP1-201ENST00000218388 WNK1Q9H4A3 2382 aa10.08□□□□□ -0.8
TIMP1-201ENST00000218388 IGKV1OR2-108A0A075B7D4 117 aa10.08□□□□□ -0.8
TIMP1-201ENST00000218388 AGPAT2O15120 278 aa10.08□□□□□ -0.8
TIMP1-201ENST00000218388 PSG1P11464 419 aa10.08□□□□□ -0.8
TIMP1-201ENST00000218388 CAMLGP49069 296 aa10.08□□□□□ -0.8
TIMP1-201ENST00000218388 ELLP55199 621 aaPredicted RBP10.08□□□□□ -0.8
TIMP1-201ENST00000218388 ZNF90Q03938 601 aa10.08□□□□□ -0.8
TIMP1-201ENST00000218388 ZNF709Q8N972 641 aa10.08□□□□□ -0.8
TIMP1-201ENST00000218388 OR9G4Q8NGQ1 327 aa10.08□□□□□ -0.8
TIMP1-201ENST00000218388 MCRIP2Q9BUT9 160 aaKnown RBP10.08□□□□□ -0.8
TIMP1-201ENST00000218388 PARD6GQ9BYG4 376 aaPredicted RBP10.08□□□□□ -0.8
TIMP1-201ENST00000218388 DAZ1Q9NQZ3 744 aaKnown RBP10.08□□□□□ -0.8
TIMP1-201ENST00000218388 BORCS7-ASMTA0A0B4J1R7 106 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 KANTRA0A1W2PQU2 76 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 A8MWP6 167 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 C17orf112F2Z3M2 114 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 K7EMT4 169 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 IL4P05112 153 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 S100A7P31151 101 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 BMI1P35226 326 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 TOMM20LQ6UXN7 152 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 UNQ9165/PRO28630Q6UXU0 137 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 KCNRGQ8N5I3 272 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 RNF125Q96EQ8 232 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 NARS2Q96I59 477 aaKnown RBP10.07□□□□□ -0.8
TIMP1-201ENST00000218388 NPCDR1Q9BY65 106 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 GPR61Q9BZJ8 451 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 WDR61Q9GZS3 305 aaKnown RBP10.07□□□□□ -0.8
TIMP1-201ENST00000218388 PFDN2Q9UHV9 154 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 ANK2Q01484 3957 aa10.07□□□□□ -0.8
TIMP1-201ENST00000218388 EIF2B2P49770 351 aaKnown RBP10.06□□□□□ -0.8
TIMP1-201ENST00000218388 PRR31Q5SQ13 230 aa10.06□□□□□ -0.8
TIMP1-201ENST00000218388 PXDC1Q5TGL8 231 aa10.06□□□□□ -0.8
TIMP1-201ENST00000218388 S100A7AQ86SG5 101 aa10.06□□□□□ -0.8
TIMP1-201ENST00000218388 MARC2Q969Z3 335 aa10.06□□□□□ -0.8
TIMP1-201ENST00000218388 RCC1LQ96I51 464 aaKnown RBP10.06□□□□□ -0.8
TIMP1-201ENST00000218388 METTL26Q96S19 204 aa10.06□□□□□ -0.8
TIMP1-201ENST00000218388 MGST2Q99735 147 aa10.06□□□□□ -0.8
TIMP1-201ENST00000218388 ARPC5LQ9BPX5 153 aa10.06□□□□□ -0.8
TIMP1-201ENST00000218388 ARL6Q9H0F7 186 aa10.06□□□□□ -0.8
TIMP1-201ENST00000218388 ZFAND3Q9H8U3 227 aa10.06□□□□□ -0.8
TIMP1-201ENST00000218388 JTBO76095 146 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 LINC00869P0C866 280 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 C4BPBP20851 252 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 NPPCP23582 126 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 RPL29P47914 159 aaKnown RBP10.05□□□□□ -0.8
TIMP1-201ENST00000218388 LYZP61626 148 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 CD300CQ08708 224 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 OPCMLQ14982 345 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 Q6ZRG5 221 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 WFDC9Q8NEX5 89 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 PBDC1Q9BVG4 233 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 GGTLC1Q9BX51 225 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 WFDC1Q9HC57 220 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 MRPL27Q9P0M9 148 aaKnown RBP10.05□□□□□ -0.8
TIMP1-201ENST00000218388 RABAC1Q9UI14 185 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 SLC45A2Q9UMX9 530 aa10.05□□□□□ -0.8
TIMP1-201ENST00000218388 IGHV3OR16-8A0A075B7F1 116 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 WI2-2373I1.2A0A1W2PRP0 233 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 A0A1W2PS18 150 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 TMEM213A2RRL7 107 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 C2orf70A6NJV1 201 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 SEC14L6B5MCN3 397 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 BCL2L11O43521 198 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 HNRNPCP07910 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
TIMP1-201ENST00000218388 CXCL2P19875 107 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 GATA2P23769 480 aaPredicted RBP10.04□□□□□ -0.8
TIMP1-201ENST00000218388 INSL3P51460 131 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 B2MP61769 119 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 EIF5AP63241 154 aaKnown RBP10.04□□□□□ -0.8
TIMP1-201ENST00000218388 TM4SF20Q53R12 229 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 C9orf66Q5T8R8 295 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 TMUB2Q71RG4 321 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 STPG3Q8N7X2 389 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 DYNLRB2Q8TF09 96 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 TMEM231Q9H6L2 316 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 SIGLEC8Q9NYZ4 499 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 PXMP4Q9Y6I8 212 aa10.04□□□□□ -0.8
TIMP1-201ENST00000218388 ZNF207O43670 478 aaKnown RBP10.03□□□□□ -0.8
TIMP1-201ENST00000218388 HYPMO75409 117 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 SAP30O75446 220 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 ORM2P19652 201 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 PLP1P60201 277 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 USF2Q15853 346 aaPredicted RBP10.03□□□□□ -0.8
TIMP1-201ENST00000218388 MIC13Q5XKP0 118 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 RPL7L1Q6DKI1 246 aaKnown RBP10.03□□□□□ -0.8
TIMP1-201ENST00000218388 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 OR1B1Q8NGR6 318 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 PPP1R14BQ96C90 147 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 GNPNAT1Q96EK6 184 aaPredicted RBP10.03□□□□□ -0.8
TIMP1-201ENST00000218388 GRAMD2BQ96HH9 432 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 ZNF414Q96IQ9 312 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 SLC39A9Q9NUM3 307 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 RNF24Q9Y225 148 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 TIMM9Q9Y5J7 89 aa10.03□□□□□ -0.8
TIMP1-201ENST00000218388 ELOA3CA0A087WX78 387 aaPredicted RBP10.02□□□□□ -0.81
TIMP1-201ENST00000218388 IGHV7-4-1A0A0J9YVY3 117 aa10.02□□□□□ -0.81
TIMP1-201ENST00000218388 COX7A2P2O60397 106 aa10.02□□□□□ -0.81
TIMP1-201ENST00000218388 CSN3P07498 182 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms