RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 IGLV2-23P01705 113 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 CD24P25063 80 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 TMEM177Q53S58 311 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 ST6GALNAC6Q969X2 333 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 TMEM186Q96B77 213 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 TXN2Q99757 166 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 GNB1LQ9BYB4 327 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 TMEM167BQ9NRX6 74 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 SSUH2Q9Y2M2 353 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 A0A1W2PRD5 423 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 A0A1W2PRF3 423 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 A0A1W2PRM7 423 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 H3BTX0 84 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 BMPR1BO00238 502 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 DLX6P56179 175 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 SLAQ13239 276 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 SLC35E1Q96K37 410 aa10.56□□□□□ -0.72
CTNS-201ENST00000046640 A0A1W2PN81 502 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 MOSP00540 346 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 GNG5P63218 68 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 TNXAQ16473 311 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 BLNKQ8WV28 456 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 TMEM133Q9H2Q1 129 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 GSX1Q9H4S2 264 aaPredicted RBP10.55□□□□□ -0.72
CTNS-201ENST00000046640 A0A1W2PPI3 338 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 DLL1O00548 723 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 APCSP02743 223 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 OR5G3P0C626 314 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 PPOXP50336 477 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 Q0VG73 95 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 Q6ZN92 141 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 ZNF331Q9NQX6 463 aaPredicted RBP10.55□□□□□ -0.72
CTNS-201ENST00000046640 IGLV2-8P01709 118 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 C3orf79P0CE67 100 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 MFAP2P55001 183 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 TMEM30BQ3MIR4 351 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 PDPNQ86YL7 162 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 TMEM167AQ8TBQ9 72 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 KCNS1Q96KK3 526 aa10.55□□□□□ -0.72
CTNS-201ENST00000046640 B9A039 149 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 CORTO00230 105 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 ORM2P19652 201 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 Q8N976 141 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 DNAJC4Q9NNZ3 241 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 IGHV2-26A0A0B4J1V2 119 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 AMY1AP04745 511 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 C8orf88P0DMB2 117 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 VMA21Q3ZAQ7 101 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 BORCS7Q96B45 105 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 SLC25A33Q9BSK2 321 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 ONECUT1Q9UBC0 465 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 TIMM8BQ9Y5J9 83 aaPredicted RBP10.54□□□□□ -0.72
CTNS-201ENST00000046640 INSIG2Q9Y5U4 225 aa10.54□□□□□ -0.72
CTNS-201ENST00000046640 CACNA1BQ00975 2339 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 TAS2R45P59539 299 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 PMCHL1Q16048 86 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 MRPL52Q86TS9 123 aaKnown RBP10.53□□□□□ -0.72
CTNS-201ENST00000046640 PPIAL4CA0A0B4J2A2 164 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 M0QZ24 198 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 COX7A2P2O60397 106 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 ZNF324O75467 553 aaPredicted RBP10.53□□□□□ -0.72
CTNS-201ENST00000046640 TOX4O94842 621 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 PPIAL4GP0DN37 164 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 ESDP10768 282 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 Q56UQ5 140 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 WDR73Q6P4I2 378 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 RNASEKQ6P5S7 137 aaKnown RBP10.53□□□□□ -0.72
CTNS-201ENST00000046640 VSTM2AQ8TAG5 236 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 SLC25A2Q9BXI2 301 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 OSTCQ9NRP0 149 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 TP73-AS1Q9UF72 201 aa10.53□□□□□ -0.72
CTNS-201ENST00000046640 TRAV9-1A0A075B6T8 112 aa10.52□□□□□ -0.72
CTNS-201ENST00000046640 HINT1P49773 126 aaPredicted RBP10.52□□□□□ -0.72
CTNS-201ENST00000046640 RPL19P84098 196 aaKnown RBP10.52□□□□□ -0.72
CTNS-201ENST00000046640 ZNF672Q499Z4 452 aaPredicted RBP10.52□□□□□ -0.72
CTNS-201ENST00000046640 NIT1Q86X76 327 aa10.52□□□□□ -0.72
CTNS-201ENST00000046640 RNF2Q99496 336 aa10.52□□□□□ -0.72
CTNS-201ENST00000046640 FBXL15Q9H469 300 aa10.52□□□□□ -0.72
CTNS-201ENST00000046640 KAAG1Q9UBP8 84 aa10.52□□□□□ -0.72
CTNS-201ENST00000046640 AMMECR1Q9Y4X0 333 aaPredicted RBP10.52□□□□□ -0.72
CTNS-201ENST00000046640 MAP1AP78559 2803 aaPredicted RBP10.52□□□□□ -0.73
CTNS-201ENST00000046640 ISLRO14498 428 aa10.52□□□□□ -0.73
CTNS-201ENST00000046640 MRGPRG-AS1Q2M3A8 158 aa10.52□□□□□ -0.73
CTNS-201ENST00000046640 ANKRD39Q53RE8 183 aa10.52□□□□□ -0.73
CTNS-201ENST00000046640 COL5A1-AS1Q5SY13 56 aa10.52□□□□□ -0.73
CTNS-201ENST00000046640 LEMD1Q68G75 181 aa10.52□□□□□ -0.73
CTNS-201ENST00000046640 PATE2Q6UY27 113 aa10.52□□□□□ -0.73
CTNS-201ENST00000046640 PNKDQ8N490 385 aa10.52□□□□□ -0.73
CTNS-201ENST00000046640 STPG4Q8N801 248 aa10.52□□□□□ -0.73
CTNS-201ENST00000046640 HILPDAQ9Y5L2 63 aa10.52□□□□□ -0.73
CTNS-201ENST00000046640 HNRNPA3P51991 378 aaKnown RBP10.51□□□□□ -0.73
CTNS-201ENST00000046640 ARF6P62330 175 aa10.51□□□□□ -0.73
CTNS-201ENST00000046640 GDF5OSQ5U4N7 250 aa10.51□□□□□ -0.73
CTNS-201ENST00000046640 OR4B1Q8NGF8 309 aa10.51□□□□□ -0.73
CTNS-201ENST00000046640 OR1B1Q8NGR6 318 aa10.51□□□□□ -0.73
CTNS-201ENST00000046640 IGF2BP2-AS1Q96M15 143 aa10.51□□□□□ -0.73
CTNS-201ENST00000046640 LY96Q9Y6Y9 160 aa10.51□□□□□ -0.73
CTNS-201ENST00000046640 TRBV9A0A0B4J1U6 114 aa10.51□□□□□ -0.73
CTNS-201ENST00000046640 SH2D7A6NKC9 451 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms