RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Rpl23a-ps3A0A140T8M7 156 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr1248A0A1L1SSZ5 307 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Slc35d1A2AKQ0 355 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Gm3618D3Z4P5 127 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Slc17a3G3UWD9 498 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr893K7N678 312 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr628K7N6B2 316 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 CapgP24452 352 aaKnown RBP9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Galr1P56479 348 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Gng2P63213 71 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Gm4951Q3UED7 406 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Ppp5cQ60676 499 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Neil3Q8K203 606 aaKnown RBP9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Lrrtm1Q8K377 522 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Vmn1r178Q8R2B6 304 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr1141Q8VFQ7 311 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr508Q8VG42 310 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Rsl24d1Q99L28 163 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Mrpl54Q9CPW3 135 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Atp6v0e1Q9CQD8 81 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 MmdQ9CQY7 238 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Q9D1K7 174 aaKnown RBP9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Gm2916Q9D9B9 127 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Smim23Q9DAL0 136 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 CklfQ9DAS1 152 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr27Q9EQ90 311 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Hnf4gQ9WUU6 408 aa9.52□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Trbv29A0A0G2LB96 114 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Tmem29A2ANF5 204 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 I0C0044D17RikA6PWL3 169 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr427E9Q7E7 315 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr177E9Q7W1 309 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 1700056E22RikF7CNM6 234 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Tnfsf12O54907 249 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 NdpP48744 131 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Fhl1P97447 280 aaKnown RBP9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 KncnQ307W7 124 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Pld6Q5SWZ9 221 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Mapk3Q63844 380 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Ptbp3Q8BHD7 523 aaKnown RBP9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 9230109A22RikQ8BHE6 111 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Vmn1r36Q8R2E3 305 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Defb11Q8R2I7 77 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 PpcsQ8VDG5 311 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr816Q8VFU2 312 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr1445Q8VFW9 314 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 HpxQ91X72 460 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Acaa1aQ921H8 424 aaKnown RBP9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Slc25a46Q9CQS4 418 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 SrpxQ9R0M3 464 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Stub1Q9WUD1 304 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Bpnt1Q9Z0S1 308 aa9.51□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr588-ps1A0A1B0GSZ2 313 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Rhox7aA2A4F1 281 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 CatsperdE9Q9F6 805 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Nkx2-8O70584 235 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 H2-EaP01904 255 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 P04224 255 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Lsm3P62311 102 aaKnown RBP9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Rpl23aP62751 156 aaKnown RBP9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Eif4eP63073 217 aaKnown RBP9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Cln6Q3U466 308 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Spint3Q3UW09 88 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Fam71f1Q3UZD7 341 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Dnd1Q6VY05 352 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Higd1cQ76I25 96 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr495Q8VF12 330 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr873Q8VFJ0 319 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr272Q8VGA0 319 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr346Q8VGJ7 309 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr101Q920Z0 308 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Rnaseh2cQ9CQ18 166 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 OcstampQ9D611 498 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr944Q9EQ91 311 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Sfrp4Q9Z1N6 351 aa9.5□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Gm16368A0A1Y7VNG9 144 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Pm20d2A3KG59 431 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Arl16B1ATY8 173 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Mmp27D3YV89 551 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Gm5519D3Z175 170 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 H2-Ab1P01921 265 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Hoxd3P09027 433 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Tcl1b2P56841 117 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Slc39a7Q31125 476 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Q32P12 615 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Taar4Q5QD15 347 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Adora3Q61618 319 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Sqstm1Q64337 442 aaKnown RBP9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr314Q7TRZ7 330 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Tm2d3Q8BJ83 261 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Gm9961Q8BNV2 113 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Aifm2Q8BUE4 373 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Gm4922Q8C0N0 497 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Iba57Q8CAK1 358 aaKnown RBP9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Olfr1280Q8VGG8 305 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Ociad1Q9CRD0 247 aaKnown RBP9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Q9CX25 107 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Shisa9Q9CZN4 424 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 S100a14Q9D2Q8 104 aa9.49□□□□□ -0.89
Ccdc28a-202ENSMUST00000080860 Copz2Q9JHH9 205 aa9.49□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 60.9 ms