RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 DPF1Q92782 380 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 ACY3Q96HD9 319 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 TMEM147Q9BVK8 224 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 UQCC1Q9NVA1 299 aa9.49□□□□□ -0.89
LINC00339-213ENST00000642137 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 IGHV4OR15-8A0A075B7B6 117 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 A0A087WW49 117 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 SMCO3A2RU48 225 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 LINC01619G3V211 115 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 BMPR1BO00238 502 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 TAAR5O14804 337 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 TRBV12-3P01733 135 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 IGLC1P0CG04 106 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 OR10J1P30954 320 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 ADMP35318 185 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 MYCNOSP40205 109 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 AP2S1P53680 142 aaPredicted RBP9.48□□□□□ -0.89
LINC00339-213ENST00000642137 YPEL3P61236 119 aaPredicted RBP9.48□□□□□ -0.89
LINC00339-213ENST00000642137 AKR1C1Q04828 323 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 ZFP69Q49AA0 526 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 TEPPQ6URK8 271 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 GPHB5Q86YW7 130 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 KCNRGQ8N5I3 272 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 TRGV9Q99603 122 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 ATP5SQ99766 215 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
LINC00339-213ENST00000642137 PPP5D1E7EU14 171 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 CCL24O00175 119 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 IGKV1-17P01599 117 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 CXCL2P19875 107 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 ZP3P21754 424 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 EIF2B2P49770 351 aaKnown RBP9.47□□□□□ -0.89
LINC00339-213ENST00000642137 RELQ04864 619 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-213ENST00000642137 ZNF616Q08AN1 781 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 CLINT1Q14677 625 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 LGALSLQ3ZCW2 172 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-213ENST00000642137 TIGITQ495A1 244 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 OR4F17Q8NGA8 305 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 RAX2Q96IS3 184 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 OR4F4Q96R69 305 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-213ENST00000642137 SMIM3Q9BZL3 60 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 WFDC1Q9HC57 220 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 FBXL17Q9UF56 701 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 WDR83OSQ9Y284 106 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 LSM4Q9Y4Z0 139 aaKnown RBP9.47□□□□□ -0.89
LINC00339-213ENST00000642137 FBN1P35555 2871 aaKnown RBP9.47□□□□□ -0.89
LINC00339-213ENST00000642137 ATRQ13535 2644 aa9.47□□□□□ -0.89
LINC00339-213ENST00000642137 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 ZFP92A6NM28 416 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 MPDU1O75352 247 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 OR2C1O95371 312 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 IFNA5P01569 189 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 FABP1P07148 127 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 RAB31Q13636 194 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 FHL3Q13643 280 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 RPEL1Q2QD12 228 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 DEFB136Q30KP8 78 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 FAM106AQ4KMX7 169 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 BTNL8Q6UX41 500 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 ZNF600Q6ZNG1 722 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 Q8WTZ3 238 aa9.46□□□□□ -0.9
LINC00339-213ENST00000642137 WDR61Q9GZS3 305 aaKnown RBP9.46□□□□□ -0.9
LINC00339-213ENST00000642137 NDUFA4O00483 81 aa9.45□□□□□ -0.9
LINC00339-213ENST00000642137 TOMM40O96008 361 aa9.45□□□□□ -0.9
LINC00339-213ENST00000642137 CFDP00746 253 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-213ENST00000642137 HOXD3P31249 432 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-213ENST00000642137 SELENOTP62341 195 aa9.45□□□□□ -0.9
LINC00339-213ENST00000642137 KLF5Q13887 457 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-213ENST00000642137 ZNF266Q14584 549 aa9.45□□□□□ -0.9
LINC00339-213ENST00000642137 CYP2G1PQ6ZSU1 146 aa9.45□□□□□ -0.9
LINC00339-213ENST00000642137 TMUB2Q71RG4 321 aa9.45□□□□□ -0.9
LINC00339-213ENST00000642137 SCGB1C1Q8TD33 95 aa9.45□□□□□ -0.9
LINC00339-213ENST00000642137 ARPC5LQ9BPX5 153 aa9.45□□□□□ -0.9
LINC00339-213ENST00000642137 BORCS7-ASMTA0A0B4J1R7 106 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 UBE2L5PA0A1B0GUS4 154 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 M0QZ24 198 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 LGALS9O00182 355 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 AGPAT2O15120 278 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 JTBO76095 146 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 RD3LP0DJH9 198 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 PSG1P11464 419 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 FGF7P21781 194 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 CAMLGP49069 296 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 ZNF90Q03938 601 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 PPP1R14BQ96C90 147 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 ZNF414Q96IQ9 312 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 DUX3Q96PT4 197 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 MGST2Q99735 147 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 ARL6Q9H0F7 186 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 CYTL1Q9NRR1 136 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 SLC45A2Q9UMX9 530 aa9.44□□□□□ -0.9
LINC00339-213ENST00000642137 KANTRA0A1W2PQU2 76 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 WI2-2373I1.2A0A1W2PRP0 233 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 C17orf112F2Z3M2 114 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 RPL29P47914 159 aaKnown RBP9.43□□□□□ -0.9
LINC00339-213ENST00000642137 SLURP1P55000 103 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 OPCMLQ14982 345 aa9.43□□□□□ -0.9
LINC00339-213ENST00000642137 RPL7L1Q6DKI1 246 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms