RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 OR2J3O76001 311 aa13.77□□□□□ -0.21
PHGDH-232ENST00000641947 HBE1P02100 147 aa13.77□□□□□ -0.21
PHGDH-232ENST00000641947 IGLC1P0CG04 106 aa13.77□□□□□ -0.21
PHGDH-232ENST00000641947 CRIP2P52943 208 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-232ENST00000641947 OR4X1Q8NH49 305 aa13.77□□□□□ -0.21
PHGDH-232ENST00000641947 CYB5BO43169 146 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 IGHG2P01859 326 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 HAGHQ16775 308 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 KLK9Q2XQG4 91 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 AKIRIN2Q53H80 203 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 C16orf82Q7Z2V1 217 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 TMEM37Q8WXS4 190 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 NARS2Q96I59 477 aaKnown RBP13.76□□□□□ -0.21
PHGDH-232ENST00000641947 TRGV9Q99603 122 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 TREM1Q9NP99 234 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 KLK9Q9UKQ9 250 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 TMEM218A2RU14 115 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 PRDM13Q9H4Q3 707 aa13.76□□□□□ -0.21
PHGDH-232ENST00000641947 M0QZK8 103 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 CD5LO43866 347 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 CLN5O75503 358 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 IGKV1-17P01599 117 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 IGHV3-23P01764 117 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 TIGITQ495A1 244 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 PATE2Q6UY27 113 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 SPNS3Q6ZMD2 512 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 MIR17HGQ75NE6 70 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 GATAD1Q8WUU5 269 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 NOL4LQ96MY1 436 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-232ENST00000641947 EIF5A2Q9GZV4 153 aaKnown RBP13.75□□□□□ -0.21
PHGDH-232ENST00000641947 GNG13Q9P2W3 67 aa13.75□□□□□ -0.21
PHGDH-232ENST00000641947 TRAV41A0A0B4J266 112 aa13.74□□□□□ -0.21
PHGDH-232ENST00000641947 RBFOX3A6NFN3 312 aa13.74□□□□□ -0.21
PHGDH-232ENST00000641947 HOXA3O43365 443 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-232ENST00000641947 IGF1P05019 195 aa13.74□□□□□ -0.21
PHGDH-232ENST00000641947 ICAM4Q14773 271 aa13.74□□□□□ -0.21
PHGDH-232ENST00000641947 MORN5Q5VZ52 161 aa13.74□□□□□ -0.21
PHGDH-232ENST00000641947 DOK5Q9P104 306 aa13.74□□□□□ -0.21
PHGDH-232ENST00000641947 FBXL7Q9UJT9 491 aa13.74□□□□□ -0.21
PHGDH-232ENST00000641947 VPREB3Q9UKI3 123 aa13.74□□□□□ -0.21
PHGDH-232ENST00000641947 TRBV9A0A0B4J1U6 114 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 A0A1W2PPV4 95 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 KRBOX1C9JBD0 128 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 STAG3L2P0CL84 134 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 STAG3L3P0CL85 134 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 TMEM95Q3KNT9 176 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 SLC35E3Q7Z769 313 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 OR5R1Q8NH85 324 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 LOC102723971A0A1B0GUV8 181 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 OR5G3P0C626 314 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 ARL14EPLP0DKL9 152 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 SELENOTP62341 195 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 RHOBP62745 196 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 ZNF506Q5JVG8 444 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 FAM78BQ5VT40 261 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 TMEM68Q96MH6 324 aa13.73□□□□□ -0.21
PHGDH-232ENST00000641947 NF1P21359 2839 aa13.72□□□□□ -0.21
PHGDH-232ENST00000641947 SFTA3P0C7M3 94 aa13.72□□□□□ -0.21
PHGDH-232ENST00000641947 RHOGP84095 191 aa13.72□□□□□ -0.21
PHGDH-232ENST00000641947 SIGLECL1Q8N7X8 197 aa13.72□□□□□ -0.21
PHGDH-232ENST00000641947 MS4A10Q96PG2 267 aa13.72□□□□□ -0.21
PHGDH-232ENST00000641947 UHRF2Q96PU4 802 aa13.72□□□□□ -0.21
PHGDH-232ENST00000641947 FUT9Q9Y231 359 aa13.72□□□□□ -0.21
PHGDH-232ENST00000641947 BCL2P10415 239 aa13.71□□□□□ -0.21
PHGDH-232ENST00000641947 PSG1P11464 419 aa13.71□□□□□ -0.21
PHGDH-232ENST00000641947 PPIFP30405 207 aaKnown RBP13.71□□□□□ -0.21
PHGDH-232ENST00000641947 PPT1P50897 306 aa13.71□□□□□ -0.21
PHGDH-232ENST00000641947 C15orf32Q32M92 178 aa13.71□□□□□ -0.21
PHGDH-232ENST00000641947 RXFP4Q8TDU9 374 aa13.71□□□□□ -0.21
PHGDH-232ENST00000641947 SMR3AQ99954 134 aa13.71□□□□□ -0.21
PHGDH-232ENST00000641947 PBDC1Q9BVG4 233 aa13.71□□□□□ -0.21
PHGDH-232ENST00000641947 YAE1D1Q9NRH1 226 aa13.71□□□□□ -0.21
PHGDH-232ENST00000641947 ZNF355PQ9NSJ1 428 aa13.71□□□□□ -0.21
PHGDH-232ENST00000641947 C21orf62Q9NYP8 219 aa13.71□□□□□ -0.21
PHGDH-232ENST00000641947 HIST1H1BP16401 226 aaKnown RBP13.71□□□□□ -0.22
PHGDH-232ENST00000641947 MFAP4P55083 255 aa13.71□□□□□ -0.22
PHGDH-232ENST00000641947 PEA15Q15121 130 aa13.71□□□□□ -0.22
PHGDH-232ENST00000641947 C10orf91Q5T1B1 145 aa13.71□□□□□ -0.22
PHGDH-232ENST00000641947 ZNF503Q96F45 646 aa13.71□□□□□ -0.22
PHGDH-232ENST00000641947 ZNF414Q96IQ9 312 aa13.71□□□□□ -0.22
PHGDH-232ENST00000641947 DUX5Q96PT3 197 aa13.71□□□□□ -0.22
PHGDH-232ENST00000641947 THYN1Q9P016 225 aa13.71□□□□□ -0.22
PHGDH-232ENST00000641947 MTORP42345 2549 aa13.7□□□□□ -0.22
PHGDH-232ENST00000641947 TRAV5A0A0B4J249 113 aa13.7□□□□□ -0.22
PHGDH-232ENST00000641947 TSPAN9O75954 239 aa13.7□□□□□ -0.22
PHGDH-232ENST00000641947 PMS2P11Q13670 270 aa13.7□□□□□ -0.22
PHGDH-232ENST00000641947 IQCF2Q8IXL9 164 aa13.7□□□□□ -0.22
PHGDH-232ENST00000641947 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
PHGDH-232ENST00000641947 COX7A2P2O60397 106 aa13.69□□□□□ -0.22
PHGDH-232ENST00000641947 SRP19P09132 144 aaKnown RBP13.69□□□□□ -0.22
PHGDH-232ENST00000641947 CFHR3Q02985 330 aa13.69□□□□□ -0.22
PHGDH-232ENST00000641947 ZNF502Q8TBZ5 544 aa13.69□□□□□ -0.22
PHGDH-232ENST00000641947 FAM167A-AS1Q96KT0 104 aa13.69□□□□□ -0.22
PHGDH-232ENST00000641947 OR2T8A6NH00 312 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 GNG7O60262 68 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 ORM2P19652 201 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 NPBWR1P48145 328 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 PLP1P60201 277 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 Q56UQ5 140 aa13.68□□□□□ -0.22
PHGDH-232ENST00000641947 KHDC3LQ587J8 217 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms