RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 HNRNPCP07910 306 aaKnown RBP eCLIP10.06□□□□□ -0.8
PHGDH-218ENST00000641491 FGF7P21781 194 aa10.06□□□□□ -0.8
PHGDH-218ENST00000641491 NHLH2Q02577 135 aa10.06□□□□□ -0.8
PHGDH-218ENST00000641491 FAM106AQ4KMX7 169 aa10.06□□□□□ -0.8
PHGDH-218ENST00000641491 ZNF343Q6P1L6 599 aa10.06□□□□□ -0.8
PHGDH-218ENST00000641491 ZNF502Q8TBZ5 544 aa10.06□□□□□ -0.8
PHGDH-218ENST00000641491 ARPC5LQ9BPX5 153 aa10.06□□□□□ -0.8
PHGDH-218ENST00000641491 ZNF747Q9BV97 191 aa10.06□□□□□ -0.8
PHGDH-218ENST00000641491 ARL6Q9H0F7 186 aa10.06□□□□□ -0.8
PHGDH-218ENST00000641491 FBXL17Q9UF56 701 aa10.06□□□□□ -0.8
PHGDH-218ENST00000641491 PFDN2Q9UHV9 154 aa10.06□□□□□ -0.8
PHGDH-218ENST00000641491 MPDU1O75352 247 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 BMI1P35226 326 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 EIF2B2P49770 351 aaKnown RBP10.05□□□□□ -0.8
PHGDH-218ENST00000641491 ZNF616Q08AN1 781 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 GAMTQ14353 236 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 ZNF345Q14585 488 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 Q5BKY6 102 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 C8orf86Q6ZUL3 223 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 TMEM116Q8NCL8 245 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 OR11H1Q8NG94 326 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 OR1N2Q8NGR9 330 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 Q8WTZ3 238 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 TMEM170AQ8WVE7 144 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 C11orf1Q9H5F2 150 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 DMRT1Q9Y5R6 373 aa10.05□□□□□ -0.8
PHGDH-218ENST00000641491 ZNF320A2RRD8 509 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 PPP5D1E7EU14 171 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 CFDP00746 253 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-218ENST00000641491 FCGR2BP31994 310 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-218ENST00000641491 SELENOTP62341 195 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 KLK9Q2XQG4 91 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 PVRIGQ6DKI7 326 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 TMEM144Q7Z5S9 345 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 BPIFCQ8NFQ6 507 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 MYOZ3Q8TDC0 251 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 PPP1R14BQ96C90 147 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 GINS3Q9BRX5 216 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 FNDC4Q9H6D8 234 aaPredicted RBP10.04□□□□□ -0.8
PHGDH-218ENST00000641491 KLK9Q9UKQ9 250 aa10.04□□□□□ -0.8
PHGDH-218ENST00000641491 TNCP24821 2201 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 CCL24O00175 119 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 JTBO76095 146 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 RD3LP0DJH9 198 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 CAMLGP49069 296 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 RUNX1Q01196 453 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 BTNL8Q6UX41 500 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 ZNF600Q6ZNG1 722 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 Q6ZRG5 221 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 WIPF2Q8TF74 440 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-218ENST00000641491 CCDC140Q96MF4 163 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 CITED1Q99966 193 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 NEURL2Q9BR09 285 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 ZNF471Q9BX82 626 aaPredicted RBP10.03□□□□□ -0.8
PHGDH-218ENST00000641491 PEMTQ9UBM1 199 aa10.03□□□□□ -0.8
PHGDH-218ENST00000641491 BMPR1BO00238 502 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 BCL2L11O43521 198 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 MYCNOSP40205 109 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 MLANAQ16655 118 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 DEFB136Q30KP8 78 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 TIGITQ495A1 244 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 TCTEX1D4Q5JR98 221 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 CYP2G1PQ6ZSU1 146 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 KCNRGQ8N5I3 272 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 TRGV9Q99603 122 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 C20orf24Q9BUV8 137 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 PBDC1Q9BVG4 233 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 ELOVL1Q9BW60 279 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 UFC1Q9Y3C8 167 aa10.02□□□□□ -0.81
PHGDH-218ENST00000641491 PLXNB1O43157 2135 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 IGHV4OR15-8A0A075B7B6 117 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 A0A087WW49 117 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 RNF222A6NCQ9 220 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 PMS2P5A8MQ11 134 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 PRSS46E5RG02 174 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 I3L521 148 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 NDUFA4O00483 81 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 IGLC1P0CG04 106 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 HOXD3P31249 432 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-218ENST00000641491 LYZP61626 148 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 ARL16Q0P5N6 197 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 EIF5AL1Q6IS14 154 aaKnown RBP10.01□□□□□ -0.81
PHGDH-218ENST00000641491 TREML4Q6UXN2 200 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 TMUB2Q71RG4 321 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 HAPLN4Q86UW8 402 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 THAP8Q8NA92 274 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 OR51G1Q8NGK1 321 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 GNPNAT1Q96EK6 184 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-218ENST00000641491 RNF24Q9Y225 148 aa10.01□□□□□ -0.81
PHGDH-218ENST00000641491 TET2Q6N021 2002 aaPredicted RBP10□□□□□ -0.81
PHGDH-218ENST00000641491 IGHV3-35A0A0C4DH35 117 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 COX7A2P2O60397 106 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 OR2C1O95371 312 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 TSPAN15O95858 294 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 TOMM40O96008 361 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 IL4P05112 153 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 TPT1P13693 172 aaKnown RBP10□□□□□ -0.81
PHGDH-218ENST00000641491 YPEL3P61236 119 aaPredicted RBP10□□□□□ -0.81
PHGDH-218ENST00000641491 VWC2Q2TAL6 325 aa10□□□□□ -0.81
PHGDH-218ENST00000641491 C1QL4Q86Z23 238 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms