RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 TMEM170AQ8WVE7 144 aa10.18□□□□□ -0.78
LINC00339-211ENST00000641009 PRRT1Q99946 306 aa10.18□□□□□ -0.78
LINC00339-211ENST00000641009 VPS13DQ5THJ4 4388 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 TRAV30A0A087WSZ9 112 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 ANKRD20A5PA0PJZ0 165 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 K7EQG2 157 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 DEFB4AO15263 64 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 IGLC1P0CG04 106 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 RND2P52198 227 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 C2orf83Q53S99 150 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 STHQ8IWL8 128 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 TMEM56-RWDD3S4R434 201 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 ZNF688P0C7X2 276 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 OR10J1P30954 320 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 NANOS2P60321 138 aaKnown RBP10.17□□□□□ -0.78
LINC00339-211ENST00000641009 TMEM187Q14656 261 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 OR1S2Q8NGQ3 325 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 RNASEH2CQ8TDP1 164 aaKnown RBP10.17□□□□□ -0.78
LINC00339-211ENST00000641009 NARS2Q96I59 477 aaKnown RBP10.17□□□□□ -0.78
LINC00339-211ENST00000641009 C11orf68Q9H3H3 251 aaKnown RBP10.17□□□□□ -0.78
LINC00339-211ENST00000641009 RABL2AQ9UBK7 228 aaPredicted RBP10.17□□□□□ -0.78
LINC00339-211ENST00000641009 RABL2BQ9UNT1 228 aa10.17□□□□□ -0.78
LINC00339-211ENST00000641009 GSTZ1O43708 216 aaPredicted RBP10.16□□□□□ -0.78
LINC00339-211ENST00000641009 SULT1A3P0DMM9 295 aa10.16□□□□□ -0.78
LINC00339-211ENST00000641009 SULT1A4P0DMN0 295 aa10.16□□□□□ -0.78
LINC00339-211ENST00000641009 NPY1RP25929 384 aa10.16□□□□□ -0.78
LINC00339-211ENST00000641009 TMBIM6P55061 237 aa10.16□□□□□ -0.78
LINC00339-211ENST00000641009 C11orf45Q8TAV5 145 aa10.16□□□□□ -0.78
LINC00339-211ENST00000641009 DCANP1Q8TF63 244 aa10.16□□□□□ -0.78
LINC00339-211ENST00000641009 SLIRPQ9GZT3 109 aaKnown RBP10.16□□□□□ -0.78
LINC00339-211ENST00000641009 MCUBQ9NWR8 336 aa10.16□□□□□ -0.78
LINC00339-211ENST00000641009 FBXL17Q9UF56 701 aa10.16□□□□□ -0.78
LINC00339-211ENST00000641009 U3KQE9 123 aa10.16□□□□□ -0.78
LINC00339-211ENST00000641009 KNCNA6PVL3 124 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 GIG44P09565 113 aaPredicted RBP10.15□□□□□ -0.78
LINC00339-211ENST00000641009 SLC25A4P12235 298 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 AKR1C4P17516 323 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 YPEL3P61236 119 aaPredicted RBP10.15□□□□□ -0.78
LINC00339-211ENST00000641009 SUPT4H1P63272 117 aaKnown RBP10.15□□□□□ -0.78
LINC00339-211ENST00000641009 USF2Q15853 346 aaPredicted RBP10.15□□□□□ -0.78
LINC00339-211ENST00000641009 NMSQ5H8A3 153 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 TRPT1Q86TN4 253 aaKnown RBP10.15□□□□□ -0.78
LINC00339-211ENST00000641009 Q8WTZ3 238 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 NPIPB3Q92617 1050 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 IL22RA2Q969J5 263 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 GRAMD2BQ96HH9 432 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 BCL7BQ9BQE9 202 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 RSL24D1Q9UHA3 163 aaKnown RBP10.15□□□□□ -0.78
LINC00339-211ENST00000641009 SCP2D1Q9UJQ7 156 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 KCNIP3Q9Y2W7 256 aa10.15□□□□□ -0.78
LINC00339-211ENST00000641009 DNAH10Q8IVF4 4471 aa10.15□□□□□ -0.79
LINC00339-211ENST00000641009 H3BMQ9 156 aa10.14□□□□□ -0.79
LINC00339-211ENST00000641009 IL4P05112 153 aa10.14□□□□□ -0.79
LINC00339-211ENST00000641009 HNRNPCP07910 306 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC00339-211ENST00000641009 TNFSF8P32971 234 aa10.14□□□□□ -0.79
LINC00339-211ENST00000641009 DHRS2Q13268 280 aa10.14□□□□□ -0.79
LINC00339-211ENST00000641009 C16orf54Q6UWD8 224 aa10.14□□□□□ -0.79
LINC00339-211ENST00000641009 LYZL2Q7Z4W2 148 aa10.14□□□□□ -0.79
LINC00339-211ENST00000641009 GLMPQ8WWB7 406 aa10.14□□□□□ -0.79
LINC00339-211ENST00000641009 ACY3Q96HD9 319 aa10.14□□□□□ -0.79
LINC00339-211ENST00000641009 SOSTQ9BQB4 213 aa10.14□□□□□ -0.79
LINC00339-211ENST00000641009 FABP12A6NFH5 140 aa10.13□□□□□ -0.79
LINC00339-211ENST00000641009 IFNA10P01566 189 aa10.13□□□□□ -0.79
LINC00339-211ENST00000641009 C4BPBP20851 252 aa10.13□□□□□ -0.79
LINC00339-211ENST00000641009 SMCO1Q147U7 214 aa10.13□□□□□ -0.79
LINC00339-211ENST00000641009 ACTL10Q5JWF8 245 aa10.13□□□□□ -0.79
LINC00339-211ENST00000641009 ETFRF1Q6IPR1 90 aa10.13□□□□□ -0.79
LINC00339-211ENST00000641009 MFFQ9GZY8 342 aa10.13□□□□□ -0.79
LINC00339-211ENST00000641009 RBKSQ9H477 322 aa10.13□□□□□ -0.79
LINC00339-211ENST00000641009 A0A0B4J2A0 478 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 HELTA6NFD8 242 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 NOL3O60936 208 aaKnown RBP10.12□□□□□ -0.79
LINC00339-211ENST00000641009 EIF2B2P49770 351 aaKnown RBP10.12□□□□□ -0.79
LINC00339-211ENST00000641009 CCR6P51684 374 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 PSMG4Q5JS54 123 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 NOXA1Q86UR1 476 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 RPP25LQ8N5L8 163 aaKnown RBP10.12□□□□□ -0.79
LINC00339-211ENST00000641009 Q8NAQ8 132 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 MCFD2Q8NI22 146 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 DTD1Q8TEA8 209 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 SCGB3A2Q96PL1 93 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 HSPB7Q9UBY9 170 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 CACFD1Q9UGQ2 172 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 SHPKQ9UHJ6 478 aa10.12□□□□□ -0.79
LINC00339-211ENST00000641009 DEDDO75618 318 aa10.11□□□□□ -0.79
LINC00339-211ENST00000641009 TOMM40O96008 361 aa10.11□□□□□ -0.79
LINC00339-211ENST00000641009 IFNA4P05014 189 aa10.11□□□□□ -0.79
LINC00339-211ENST00000641009 RD3LP0DJH9 198 aa10.11□□□□□ -0.79
LINC00339-211ENST00000641009 SPP1P10451 314 aa10.11□□□□□ -0.79
LINC00339-211ENST00000641009 MORN3Q6PF18 240 aaPredicted RBP10.11□□□□□ -0.79
LINC00339-211ENST00000641009 LGI3Q8N145 548 aa10.11□□□□□ -0.79
LINC00339-211ENST00000641009 CLEC5AQ9NY25 188 aa10.11□□□□□ -0.79
LINC00339-211ENST00000641009 U3KQ87 197 aa10.11□□□□□ -0.79
LINC00339-211ENST00000641009 DNAH6Q9C0G6 4158 aa10.11□□□□□ -0.79
LINC00339-211ENST00000641009 IGHV4-28A0A0C4DH34 117 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 BUB3O43684 328 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 RBMY1A1P0DJD3 496 aaKnown RBP10.1□□□□□ -0.79
LINC00339-211ENST00000641009 RBMY1CP0DJD4 496 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 PSG1P11464 419 aa10.1□□□□□ -0.79
LINC00339-211ENST00000641009 ANXA3P12429 323 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms