RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 GGTLC1Q9BX51 225 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 ACTR3CQ9C0K3 210 aaPredicted RBP9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 ZNF702PQ9H963 129 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 SERTAD4Q9NUC0 356 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 SLC39A9Q9NUM3 307 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 LSM4Q9Y4Z0 139 aaKnown RBP9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 RYR3Q15413 4870 aa9.34□□□□□ -0.91
ERGIC3-220ENST00000640748 TRAV1-1A0A0B4J248 108 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 CTXND1A0A1B0GTU2 59 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 A0A1B0GV50 99 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 CYB5BO43169 146 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 AREGP15514 252 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 SSBP2P81877 361 aaPredicted RBP9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 GAMTQ14353 236 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 FXYD3Q14802 87 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 GUK1Q16774 197 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 PVRIGQ6DKI7 326 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 REC114Q7Z4M0 266 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 Q8N2B8 174 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 OR1P1Q8NH06 330 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 OR2T6Q8NHC8 308 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 RCC1LQ96I51 464 aaKnown RBP9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 F11RQ9Y624 299 aaKnown RBP9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 PXMP4Q9Y6I8 212 aa9.33□□□□□ -0.92
ERGIC3-220ENST00000640748 TMEM218A2RU14 115 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 CD5P06127 495 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 CD28P10747 220 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 RPL29P47914 159 aaKnown RBP9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 SRSF3P84103 164 aaKnown RBP9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 ZNF726P1Q15940 193 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 FAM122CQ6P4D5 195 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 ZNF562Q6V9R5 426 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 OR1L6Q8NGR2 347 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 MISP3Q96FF7 219 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 RASL11BQ9BPW5 248 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 NPFFR1Q9GZQ6 430 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 TMEM231Q9H6L2 316 aa9.32□□□□□ -0.92
ERGIC3-220ENST00000640748 MAP1LC3B2A6NCE7 125 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 B2MP61769 119 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 CCL20P78556 96 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 MLANAQ16655 118 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 MIC13Q5XKP0 118 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 LCN15Q6UWW0 184 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 RPP25LQ8N5L8 163 aaKnown RBP9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 Q8N9W7 124 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 MRAPQ8TCY5 172 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 ARPC1AQ92747 370 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 MAP1LC3BQ9GZQ8 125 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 EIF5A2Q9GZV4 153 aaKnown RBP9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 SMDT1Q9H4I9 107 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 SLC25A22Q9H936 323 aa9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 AURKAIP1Q9NWT8 199 aaPredicted RBP9.31□□□□□ -0.92
ERGIC3-220ENST00000640748 A0A1W2PPV4 95 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 RBFOX3A6NFN3 312 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 SEC14L6B5MCN3 397 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 YIF1AO95070 293 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 IFNA1P01562 189 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 HLA-DRB1P01911 266 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 APELAP0DMC3 54 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 CTRB1P17538 263 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 OR10J1P30954 320 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 CDC34P49427 236 aaPredicted RBP9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 MFAP2P55001 183 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 CX3CL1P78423 397 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 NSUN5P1Q3KNT7 163 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 CTRB2Q6GPI1 263 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 Q6ZS46 218 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 SSX7Q7RTT5 188 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 CCDC28AQ8IWP9 274 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 STPG3Q8N7X2 389 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 THAP8Q8NA92 274 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 ACY3Q96HD9 319 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 CITED2Q99967 270 aaPredicted RBP9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 SCRT1Q9BWW7 348 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 WNT10AQ9GZT5 417 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 FNDC4Q9H6D8 234 aaPredicted RBP9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 SLC45A2Q9UMX9 530 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 COL7A1Q02388 2944 aa9.3□□□□□ -0.92
ERGIC3-220ENST00000640748 A6NDX4 124 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 NPIPB5A8MRT5 1133 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 F8W036 122 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 CRYGCP07315 174 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 DEFA4P12838 97 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 FGF8P55075 233 aaPredicted RBP9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 PRR20EP86478 221 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 PRR20CP86479 221 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 PRR20DP86480 221 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 PRR20BP86481 221 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 PRR20AP86496 221 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 ZNF506Q5JVG8 444 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 CYP2G1PQ6ZSU1 146 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 NDUFA11Q86Y39 141 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 NPIPB3Q92617 1050 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 RAB24Q969Q5 203 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 RBM14Q96PK6 669 aaKnown RBP9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 SLC25A33Q9BSK2 321 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 MOB4Q9Y3A3 225 aa9.29□□□□□ -0.92
ERGIC3-220ENST00000640748 IGKV1OR2-108A0A075B7D4 117 aa9.28□□□□□ -0.92
ERGIC3-220ENST00000640748 IGHV7-81A0A0B4J1V7 117 aa9.28□□□□□ -0.92
ERGIC3-220ENST00000640748 MT-CO2P00403 227 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 235.9 ms