RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 SEPSECSQ9HD40 501 aaKnown RBP14.43□□□□□ -0.1
SCARB2-223ENST00000640640 NCOA6Q14686 2063 aaPredicted RBP14.42□□□□□ -0.1
SCARB2-223ENST00000640640 LTBP2Q14767 1821 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 WIPF3A6NGB9 483 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 COLCA2A8K830 154 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 MYOD1P15172 320 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 UQCR10Q9UDW1 63 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 C15orf62A8K5M9 175 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 DKK1O94907 266 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 COL5A1-AS1Q5SY13 56 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 TEX38Q6PEX7 206 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 TMEM136Q6ZRR5 245 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 CIARTQ8N365 385 aaPredicted RBP14.42□□□□□ -0.1
SCARB2-223ENST00000640640 IGHV1-3A0A0C4DH29 117 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 WDR86Q86TI4 376 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 MGST2Q99735 147 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 OTORQ9NRC9 128 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST1H2BKO60814 126 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 IGHV3-11P01762 117 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST1H2BJP06899 126 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST1H2BOP23527 126 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST1H2BBP33778 126 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST1H2BDP58876 126 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST1H2BCP62807 126 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST2H2BEQ16778 126 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.42□□□□□ -0.1
SCARB2-223ENST00000640640 DDB2Q92466 427 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 NEUROG1Q92886 237 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST1H2BHQ93079 126 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST1H2BNQ99877 126 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 HIST1H2BMQ99879 126 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 OSTCQ9NRP0 149 aa14.42□□□□□ -0.1
SCARB2-223ENST00000640640 A6NDN8 102 aa14.41□□□□□ -0.1
SCARB2-223ENST00000640640 H0YJW9 148 aa14.41□□□□□ -0.1
SCARB2-223ENST00000640640 ATOH7Q8N100 152 aa14.41□□□□□ -0.1
SCARB2-223ENST00000640640 SYT8Q8NBV8 401 aa14.41□□□□□ -0.1
SCARB2-223ENST00000640640 TRAV5A0A0B4J249 113 aa14.41□□□□□ -0.1
SCARB2-223ENST00000640640 SNRPD3P62318 126 aaKnown RBP14.41□□□□□ -0.1
SCARB2-223ENST00000640640 LYPD2Q6UXB3 125 aa14.41□□□□□ -0.1
SCARB2-223ENST00000640640 TCF23Q7RTU1 214 aa14.41□□□□□ -0.1
SCARB2-223ENST00000640640 CRIM1Q9NZV1 1036 aa14.41□□□□□ -0.1
SCARB2-223ENST00000640640 SPATA31B1PQ5VZV4 182 aa14.41□□□□□ -0.1
SCARB2-223ENST00000640640 RNF166Q96A37 237 aaPredicted RBP14.41□□□□□ -0.1
SCARB2-223ENST00000640640 MSRB2Q9Y3D2 182 aa14.41□□□□□ -0.1
SCARB2-223ENST00000640640 IGKV3-20P01619 116 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 RHOGP84095 191 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 MUC21A0A0G2JKD1 596 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 MUC21A0A140T8X8 626 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 IZUMO1RA6ND01 250 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 ERVK11-1P61568 191 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 PRR30Q53SZ7 412 aaPredicted RBP14.4□□□□□ -0.1
SCARB2-223ENST00000640640 MUC21Q5SSG8 566 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 AGMATQ9BSE5 352 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 TMEM242Q9NWH2 141 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 IGKV1-16P04430 117 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 FAM159AQ6UWV7 190 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 TMEM170AQ8WVE7 144 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 TRBV24-1A0A075B6N3 115 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 K7ENP7 123 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 LY6HO94772 140 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 WNT2P09544 360 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 DLX1P56177 255 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 ZNF502Q8TBZ5 544 aa14.4□□□□□ -0.1
SCARB2-223ENST00000640640 TRBV20OR9-2A0A075B6H5 130 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 OR4C46A6NHA9 309 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 E7EQL1 145 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 EFNA4P52798 201 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 FAM209BQ5JX69 171 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 ZNF600Q6ZNG1 722 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 COL25A1Q9BXS0 654 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-223ENST00000640640 TBL2Q9Y4P3 447 aaKnown RBP14.39□□□□□ -0.11
SCARB2-223ENST00000640640 SOX21Q9Y651 276 aaPredicted RBP14.39□□□□□ -0.11
SCARB2-223ENST00000640640 OTOGLQ3ZCN5 2332 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 NUDT3O95989 172 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 TSPOP30536 169 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 HAX1O00165 279 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 TMEM50AO95807 157 aa14.39□□□□□ -0.11
SCARB2-223ENST00000640640 HINT1P49773 126 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-223ENST00000640640 PIP4P1Q86T03 277 aa14.38□□□□□ -0.11
SCARB2-223ENST00000640640 SOD3P08294 240 aa14.38□□□□□ -0.11
SCARB2-223ENST00000640640 C8orf46Q8TAG6 207 aa14.38□□□□□ -0.11
SCARB2-223ENST00000640640 KCNS1Q96KK3 526 aa14.38□□□□□ -0.11
SCARB2-223ENST00000640640 PCDH15Q96QU1 1955 aa14.38□□□□□ -0.11
SCARB2-223ENST00000640640 IGHV3OR16-12A0A075B7B8 117 aa14.38□□□□□ -0.11
SCARB2-223ENST00000640640 CXCL1P09341 107 aa14.38□□□□□ -0.11
SCARB2-223ENST00000640640 KLRD1Q13241 179 aa14.38□□□□□ -0.11
SCARB2-223ENST00000640640 Q6AWC8 147 aa14.38□□□□□ -0.11
SCARB2-223ENST00000640640 FAM53AQ6NSI3 398 aaPredicted RBP14.38□□□□□ -0.11
SCARB2-223ENST00000640640 ST6GALNAC3Q8NDV1 305 aa14.38□□□□□ -0.11
SCARB2-223ENST00000640640 ITGB1BP1O14713 200 aa14.37□□□□□ -0.11
SCARB2-223ENST00000640640 COL8A2P25067 703 aa14.37□□□□□ -0.11
SCARB2-223ENST00000640640 CEACAM8P31997 349 aaPredicted RBP14.37□□□□□ -0.11
SCARB2-223ENST00000640640 SLC25A34Q6PIV7 304 aa14.37□□□□□ -0.11
SCARB2-223ENST00000640640 KLK15Q9H2R5 256 aa14.37□□□□□ -0.11
SCARB2-223ENST00000640640 PSG1P11464 419 aa14.37□□□□□ -0.11
SCARB2-223ENST00000640640 TPTE2P1Q5T6R2 138 aa14.37□□□□□ -0.11
SCARB2-223ENST00000640640 LINC01551Q86U37 167 aa14.37□□□□□ -0.11
SCARB2-223ENST00000640640 TRAV40A0A0B4J280 105 aa14.37□□□□□ -0.11
SCARB2-223ENST00000640640 FAM74A4Q5TZK3 123 aa14.37□□□□□ -0.11
SCARB2-223ENST00000640640 TMEM70Q9BUB7 260 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms