RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 SIGLEC8Q9NYZ4 499 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 SOX21Q9Y651 276 aaPredicted RBP9.91□□□□□ -0.82
GFAP-228ENST00000638488 OTOGLQ3ZCN5 2332 aa9.91□□□□□ -0.82
GFAP-228ENST00000638488 FAM90A9PA6NNJ1 464 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 OR11H12B2RN74 326 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 FAM87AP0C7U9 286 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 ZNF497Q6ZNH5 498 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 PIP4P1Q86T03 277 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 OR11H1Q8NG94 326 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 OR11H2Q8NH07 326 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 SSMEM1Q8WWF3 244 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 NAA38Q9BRA0 125 aaKnown RBP9.9□□□□□ -0.82
GFAP-228ENST00000638488 SSBP3Q9BWW4 388 aaPredicted RBP9.9□□□□□ -0.82
GFAP-228ENST00000638488 MBNL3Q9NUK0 354 aaKnown RBP9.9□□□□□ -0.82
GFAP-228ENST00000638488 MRPL16Q9NX20 251 aaKnown RBP9.9□□□□□ -0.82
GFAP-228ENST00000638488 GGTLC3B5MD39 225 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 SYNGR1O43759 233 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 LYZL6O75951 148 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 HBBP68871 147 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 LTC4SQ16873 150 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 TEPPQ6URK8 271 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 ADAMTSL5Q6ZMM2 481 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 FAM214BQ7L5A3 538 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 ADTRPQ96IZ2 230 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 COL25A1Q9BXS0 654 aaPredicted RBP9.9□□□□□ -0.82
GFAP-228ENST00000638488 SPANXB1Q9NS25 103 aaPredicted RBP9.9□□□□□ -0.82
GFAP-228ENST00000638488 ZNF355PQ9NSJ1 428 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 TRAPPC2LQ9UL33 140 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 SELENOKQ9Y6D0 94 aa9.9□□□□□ -0.82
GFAP-228ENST00000638488 A1L4Q6 167 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 C17orf98A8MV24 154 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 BRWD1-AS2P59051 145 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 PRR20EP86478 221 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 PRR20CP86479 221 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 PRR20DP86480 221 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 PRR20BP86481 221 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 PRR20AP86496 221 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 AESQ08117 197 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 CNEP1R1Q8N9A8 125 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 SNRNP40Q96DI7 357 aaKnown RBP9.89□□□□□ -0.83
GFAP-228ENST00000638488 C1orf159Q96HA4 380 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 HILPDAQ9Y5L2 63 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 F8W1H4 67 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 CA6P23280 308 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 CAMPP49913 170 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 MIR17HGQ75NE6 70 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 VGLL1Q99990 258 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 BOD1L1Q8NFC6 3051 aa9.89□□□□□ -0.83
GFAP-228ENST00000638488 DIDO1Q9BTC0 2240 aaKnown RBP9.89□□□□□ -0.83
GFAP-228ENST00000638488 HIGD1CA8MV81 97 aa9.88□□□□□ -0.83
GFAP-228ENST00000638488 VDAC2P45880 294 aaPredicted RBP9.88□□□□□ -0.83
GFAP-228ENST00000638488 DEFB109BQ30KR1 87 aa9.88□□□□□ -0.83
GFAP-228ENST00000638488 Q6P435 159 aa9.88□□□□□ -0.83
GFAP-228ENST00000638488 ZNF479Q96JC4 524 aa9.88□□□□□ -0.83
GFAP-228ENST00000638488 PLEKHA3Q9HB20 300 aa9.88□□□□□ -0.83
GFAP-228ENST00000638488 HEYLQ9NQ87 328 aaPredicted RBP9.88□□□□□ -0.83
GFAP-228ENST00000638488 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.88□□□□□ -0.83
GFAP-228ENST00000638488 SMAD7O15105 426 aaKnown RBP9.88□□□□□ -0.83
GFAP-228ENST00000638488 IGFBP2P18065 325 aa9.88□□□□□ -0.83
GFAP-228ENST00000638488 GCSAMQ8N6F7 178 aa9.88□□□□□ -0.83
GFAP-228ENST00000638488 RAB37Q96AX2 223 aa9.88□□□□□ -0.83
GFAP-228ENST00000638488 NDFIP1Q9BT67 221 aa9.88□□□□□ -0.83
GFAP-228ENST00000638488 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
GFAP-228ENST00000638488 SNAI2O43623 268 aa9.87□□□□□ -0.83
GFAP-228ENST00000638488 IGHV3-7P01780 117 aa9.87□□□□□ -0.83
GFAP-228ENST00000638488 GUSBP1Q15486 140 aa9.87□□□□□ -0.83
GFAP-228ENST00000638488 NANOS1Q8WY41 292 aaKnown RBP9.87□□□□□ -0.83
GFAP-228ENST00000638488 GCM1Q9NP62 436 aa9.87□□□□□ -0.83
GFAP-228ENST00000638488 USF3Q68DE3 2245 aa9.87□□□□□ -0.83
GFAP-228ENST00000638488 FNDC10F2Z333 226 aa9.87□□□□□ -0.83
GFAP-228ENST00000638488 TAS2R45P59539 299 aa9.87□□□□□ -0.83
GFAP-228ENST00000638488 GFRA3O60609 400 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 SMIM13P0DJ93 91 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 ZNF418Q8TF45 676 aaPredicted RBP9.86□□□□□ -0.83
GFAP-228ENST00000638488 ZNF503Q96F45 646 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 ABHD17AQ96GS6 310 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 C19orf24Q9BVV8 132 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 PKIBQ9C010 78 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 CT45A6P0DMU7 189 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 CT45A5P0DMU8 189 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 CT45A7P0DMV0 189 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 IGHV1-2P23083 117 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 FOXA3P55318 350 aaPredicted RBP9.86□□□□□ -0.83
GFAP-228ENST00000638488 TBC1D28Q2M2D7 210 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 CT45A1Q5HYN5 189 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 ZNF808Q8N4W9 903 aaPredicted RBP9.86□□□□□ -0.83
GFAP-228ENST00000638488 CT45A3Q8NHU0 189 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 SVILO95425 2214 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 VWC2LB2RUY7 222 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 Q6ZR03 302 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 NEU4Q8WWR8 484 aaPredicted RBP9.86□□□□□ -0.83
GFAP-228ENST00000638488 HSD17B10Q99714 261 aaKnown RBP9.86□□□□□ -0.83
GFAP-228ENST00000638488 MCRIP2Q9BUT9 160 aaKnown RBP9.86□□□□□ -0.83
GFAP-228ENST00000638488 ZNF747Q9BV97 191 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 JPT1Q9UK76 154 aa9.86□□□□□ -0.83
GFAP-228ENST00000638488 ESPL1Q14674 2120 aa9.85□□□□□ -0.83
GFAP-228ENST00000638488 TRGV8A0A0C4DH27 118 aa9.85□□□□□ -0.83
GFAP-228ENST00000638488 TEX50A0A1B0GTY4 177 aa9.85□□□□□ -0.83
GFAP-228ENST00000638488 TRAT1Q6PIZ9 186 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms