RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CORTO00230 105 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 PYYP10082 97 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 S100A2P29034 98 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 MMDQ15546 238 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 LHFPL4Q7Z7J7 247 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 TMEM116Q8NCL8 245 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 IGFBPL1Q8WX77 278 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 A0A0U1RQK1 487 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 PRTN3P24158 256 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 GNG4P50150 75 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 CENPWQ5EE01 88 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 LINC00305Q7Z4B0 112 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 LURAP1LQ8IV03 231 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 PAXXQ9BUH6 204 aa17.16■□□□□ 0.34
CLN6-224ENST00000638076 A0A1W2PRD5 423 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 A0A1W2PRF3 423 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 A0A1W2PRM7 423 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 ZNF320A2RRD8 509 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 NDUFS7O75251 213 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 GPR6P46095 362 aaPredicted RBP17.15■□□□□ 0.34
CLN6-224ENST00000638076 UQCRFS1P47985 274 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 ACTL10Q5JWF8 245 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 TRGV9Q99603 122 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 NIT2Q9NQR4 276 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 DMRT1Q9Y5R6 373 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 ORM2P19652 201 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 CEACAM3P40198 252 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 CFHR4Q92496 578 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 PITPNC1Q9UKF7 332 aa17.15■□□□□ 0.34
CLN6-224ENST00000638076 ODF3BA8MYP8 253 aa17.14■□□□□ 0.33
CLN6-224ENST00000638076 OR5I1Q13606 314 aa17.14■□□□□ 0.33
CLN6-224ENST00000638076 OR1B1Q8NGR6 318 aa17.14■□□□□ 0.33
CLN6-224ENST00000638076 OR51M1Q9H341 326 aa17.14■□□□□ 0.33
CLN6-224ENST00000638076 UBTD1Q9HAC8 227 aa17.14■□□□□ 0.33
CLN6-224ENST00000638076 HIVEP3Q5T1R4 2406 aa17.14■□□□□ 0.33
CLN6-224ENST00000638076 ITPR1Q14643 2758 aa17.14■□□□□ 0.33
CLN6-224ENST00000638076 CNIH1O95406 144 aa17.14■□□□□ 0.33
CLN6-224ENST00000638076 ITLN2Q8WWU7 325 aaPredicted RBP17.14■□□□□ 0.33
CLN6-224ENST00000638076 SLC17A3O00476 420 aa17.13■□□□□ 0.33
CLN6-224ENST00000638076 CD24P25063 80 aa17.13■□□□□ 0.33
CLN6-224ENST00000638076 PAX2Q02962 417 aa17.13■□□□□ 0.33
CLN6-224ENST00000638076 BTF3L4Q96K17 158 aa17.13■□□□□ 0.33
CLN6-224ENST00000638076 SPTBN1Q01082 2364 aaKnown RBP17.13■□□□□ 0.33
CLN6-224ENST00000638076 NBR2O15453 112 aa17.13■□□□□ 0.33
CLN6-224ENST00000638076 ERVFC1-1P60608 527 aa17.12■□□□□ 0.33
CLN6-224ENST00000638076 FXYD5Q96DB9 178 aa17.12■□□□□ 0.33
CLN6-224ENST00000638076 GSX1Q9H4S2 264 aaPredicted RBP17.12■□□□□ 0.33
CLN6-224ENST00000638076 GNLYP22749 145 aa17.12■□□□□ 0.33
CLN6-224ENST00000638076 OR10D4PQ8NGN7 298 aa17.12■□□□□ 0.33
CLN6-224ENST00000638076 PERPQ96FX8 193 aa17.12■□□□□ 0.33
CLN6-224ENST00000638076 WNT10AQ9GZT5 417 aa17.12■□□□□ 0.33
CLN6-224ENST00000638076 SNRPCP09234 159 aaKnown RBP17.11■□□□□ 0.33
CLN6-224ENST00000638076 ZFP36P26651 326 aaKnown RBP17.11■□□□□ 0.33
CLN6-224ENST00000638076 VMO1Q7Z5L0 202 aa17.11■□□□□ 0.33
CLN6-224ENST00000638076 IL36BQ9NZH7 164 aa17.11■□□□□ 0.33
CLN6-224ENST00000638076 FABP4P15090 132 aa17.1■□□□□ 0.33
CLN6-224ENST00000638076 RPL15P61313 204 aaKnown RBP17.1■□□□□ 0.33
CLN6-224ENST00000638076 HES1Q14469 280 aa17.1■□□□□ 0.33
CLN6-224ENST00000638076 TIGITQ495A1 244 aa17.1■□□□□ 0.33
CLN6-224ENST00000638076 XKRY2A2RUG3 117 aa17.1■□□□□ 0.33
CLN6-224ENST00000638076 A6NNC1 897 aa17.1■□□□□ 0.33
CLN6-224ENST00000638076 SSX2Q16385 188 aa17.1■□□□□ 0.33
CLN6-224ENST00000638076 FBLN7Q53RD9 439 aa17.1■□□□□ 0.33
CLN6-224ENST00000638076 TMEM183AQ8IXX5 376 aa17.1■□□□□ 0.33
CLN6-224ENST00000638076 NPBQ8NG41 125 aa17.1■□□□□ 0.33
CLN6-224ENST00000638076 SRSF8Q9BRL6 282 aaKnown RBP17.1■□□□□ 0.33
CLN6-224ENST00000638076 I3L2K1 104 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 PYY3Q5JQD4 70 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 C1orf122Q6ZSJ8 110 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 IGF2BP2-AS1Q96M15 143 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 TRAPPC1Q9Y5R8 145 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 C19orf84I3L1E1 186 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 HYPMO75409 117 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 NDUFA3O95167 84 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 ZNF329Q86UD4 541 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 STXBP6Q8NFX7 210 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 V9GYV3 84 aa17.09■□□□□ 0.33
CLN6-224ENST00000638076 IGLV2-8P01709 118 aa17.08■□□□□ 0.33
CLN6-224ENST00000638076 LINC00479Q96M42 142 aa17.08■□□□□ 0.33
CLN6-224ENST00000638076 FAM103A1Q9BTL3 118 aaKnown RBP17.08■□□□□ 0.33
CLN6-224ENST00000638076 FXYD3Q14802 87 aa17.08■□□□□ 0.32
CLN6-224ENST00000638076 KIR3DL3Q8N743 410 aa17.08■□□□□ 0.32
CLN6-224ENST00000638076 RNASE7Q9H1E1 156 aaKnown RBP17.08■□□□□ 0.32
CLN6-224ENST00000638076 IGLC1P0CG04 106 aa17.07■□□□□ 0.32
CLN6-224ENST00000638076 DYNAPQ8N1N2 210 aa17.07■□□□□ 0.32
CLN6-224ENST00000638076 GCGP01275 180 aa17.07■□□□□ 0.32
CLN6-224ENST00000638076 HOXB4P17483 251 aaPredicted RBP17.07■□□□□ 0.32
CLN6-224ENST00000638076 EFNA4P52798 201 aa17.07■□□□□ 0.32
CLN6-224ENST00000638076 PLP1P60201 277 aa17.07■□□□□ 0.32
CLN6-224ENST00000638076 RANP62826 216 aaKnown RBP17.07■□□□□ 0.32
CLN6-224ENST00000638076 RPEL1Q2QD12 228 aa17.07■□□□□ 0.32
CLN6-224ENST00000638076 BLNKQ8WV28 456 aa17.07■□□□□ 0.32
CLN6-224ENST00000638076 HIST1H2BLQ99880 126 aa17.07■□□□□ 0.32
CLN6-224ENST00000638076 CDC42EP3Q9UKI2 254 aa17.07■□□□□ 0.32
CLN6-224ENST00000638076 MGST1P10620 155 aaKnown RBP17.06■□□□□ 0.32
CLN6-224ENST00000638076 PSG1P11464 419 aa17.06■□□□□ 0.32
CLN6-224ENST00000638076 COA6Q5JTJ3 125 aaKnown RBP17.06■□□□□ 0.32
CLN6-224ENST00000638076 LINC00469Q8N7U9 141 aa17.06■□□□□ 0.32
CLN6-224ENST00000638076 CNN1P51911 297 aaKnown RBP17.05■□□□□ 0.32
CLN6-224ENST00000638076 TAS2R60P59551 318 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms