RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 ZFAND3Q9H8U3 227 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 HSPB7Q9UBY9 170 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 U3KQ87 197 aa10.27□□□□□ -0.77
PNKP-228ENST00000637325 APOHP02749 345 aaPredicted RBP10.26□□□□□ -0.77
PNKP-228ENST00000637325 RPL35AP18077 110 aaKnown RBP10.26□□□□□ -0.77
PNKP-228ENST00000637325 RBMS2Q15434 407 aaKnown RBP10.26□□□□□ -0.77
PNKP-228ENST00000637325 FAM90A2PQ658T7 463 aa10.26□□□□□ -0.77
PNKP-228ENST00000637325 PRSS54Q6PEW0 395 aa10.26□□□□□ -0.77
PNKP-228ENST00000637325 CENPSQ8N2Z9 138 aa10.26□□□□□ -0.77
PNKP-228ENST00000637325 Q8WTZ3 238 aa10.26□□□□□ -0.77
PNKP-228ENST00000637325 VSIRQ9H7M9 311 aa10.26□□□□□ -0.77
PNKP-228ENST00000637325 LINC00854A0A1B0GVQ3 168 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 NAP1L6A6NFF2 107 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 DFFBO76075 338 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 SFT2D2O95562 160 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 IFNA4P05014 189 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 OR10J1P30954 320 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 PPP1R1AQ13522 171 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 APRG1Q8IVJ8 170 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 STPG3Q8N7X2 389 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 IL17DQ8TAD2 202 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 TMEM170AQ8WVE7 144 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 ACY3Q96HD9 319 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 NDUFA13Q9P0J0 144 aa10.25□□□□□ -0.77
PNKP-228ENST00000637325 CENPXA8MT69 81 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 UBE2CO00762 179 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 MED6O75586 246 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 IGKV1-17P01599 117 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 IGLC1P0CG04 106 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 ATP5IP56385 69 aaPredicted RBP10.24□□□□□ -0.77
PNKP-228ENST00000637325 BAK1Q16611 211 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 LILRB2Q8N423 598 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 LRTM2Q8N967 370 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 NPIPB3Q92617 1050 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 GRAMD2BQ96HH9 432 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 OVOL2Q9BRP0 275 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 MS4A6AQ9H2W1 248 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 RABAC1Q9UI14 185 aa10.24□□□□□ -0.77
PNKP-228ENST00000637325 PAIP2BQ9ULR5 123 aaKnown RBP10.24□□□□□ -0.77
PNKP-228ENST00000637325 DYNC2H1Q8NCM8 4307 aaKnown RBP10.24□□□□□ -0.77
PNKP-228ENST00000637325 KIR2DL5BA0A0G2JN68 375 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 KIR2DL5BA0A0G2JPC4 375 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 HOXB5P09067 269 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 SLC25A6P12236 298 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 CRYBB3P26998 211 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 P2RY1P47900 373 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 UBE2MP61081 183 aaKnown RBP10.23□□□□□ -0.77
PNKP-228ENST00000637325 YPEL3P61236 119 aaPredicted RBP10.23□□□□□ -0.77
PNKP-228ENST00000637325 RAB11AP62491 216 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 KIR2DL5AQ8N109 375 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 KIR2DL5BQ8NHK3 375 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 MAP6D1Q9H9H5 199 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 TMED3Q9Y3Q3 217 aa10.23□□□□□ -0.77
PNKP-228ENST00000637325 SPRY2O43597 315 aa10.22□□□□□ -0.77
PNKP-228ENST00000637325 PITX3O75364 302 aa10.22□□□□□ -0.77
PNKP-228ENST00000637325 HNRNPCP07910 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
PNKP-228ENST00000637325 RD3LP0DJH9 198 aa10.22□□□□□ -0.77
PNKP-228ENST00000637325 IAPPP10997 89 aa10.22□□□□□ -0.77
PNKP-228ENST00000637325 EIF2B2P49770 351 aaKnown RBP10.22□□□□□ -0.77
PNKP-228ENST00000637325 ZNF124Q15973 351 aa10.22□□□□□ -0.77
PNKP-228ENST00000637325 DEFB135Q30KP9 77 aa10.22□□□□□ -0.77
PNKP-228ENST00000637325 Q6ZWC4 215 aa10.22□□□□□ -0.77
PNKP-228ENST00000637325 STXBP6Q8NFX7 210 aa10.22□□□□□ -0.77
PNKP-228ENST00000637325 SLC35E1Q96K37 410 aa10.22□□□□□ -0.77
PNKP-228ENST00000637325 STARD9Q9P2P6 4700 aa10.21□□□□□ -0.77
PNKP-228ENST00000637325 TRAV2A0A0B4J234 112 aa10.21□□□□□ -0.77
PNKP-228ENST00000637325 FAM90A26D6RGX4 464 aa10.21□□□□□ -0.77
PNKP-228ENST00000637325 NDUFB6O95139 128 aa10.21□□□□□ -0.77
PNKP-228ENST00000637325 TOMM40O96008 361 aa10.21□□□□□ -0.77
PNKP-228ENST00000637325 IL4P05112 153 aa10.21□□□□□ -0.77
PNKP-228ENST00000637325 GPX4P36969 197 aaPredicted RBP10.21□□□□□ -0.77
PNKP-228ENST00000637325 DEFB131AP59861 70 aa10.21□□□□□ -0.77
PNKP-228ENST00000637325 RPP30P78346 268 aaKnown RBP10.21□□□□□ -0.77
PNKP-228ENST00000637325 GGNBP1Q5YKI7 109 aa10.21□□□□□ -0.77
PNKP-228ENST00000637325 COQ8AQ8NI60 647 aa10.21□□□□□ -0.77
PNKP-228ENST00000637325 CIB3Q96Q77 187 aaPredicted RBP10.21□□□□□ -0.77
PNKP-228ENST00000637325 TP53TG1Q9Y2A0 90 aa10.21□□□□□ -0.77
PNKP-228ENST00000637325 TENM2Q9NT68 2774 aa10.21□□□□□ -0.78
PNKP-228ENST00000637325 CSMD3Q7Z407 3707 aa10.21□□□□□ -0.78
PNKP-228ENST00000637325 C9orf170A2RU37 121 aa10.2□□□□□ -0.78
PNKP-228ENST00000637325 HELTA6NFD8 242 aa10.2□□□□□ -0.78
PNKP-228ENST00000637325 ZFP92A6NM28 416 aa10.2□□□□□ -0.78
PNKP-228ENST00000637325 SDHCQ99643 169 aaPredicted RBP10.2□□□□□ -0.78
PNKP-228ENST00000637325 C7orf50Q9BRJ6 194 aaKnown RBP10.2□□□□□ -0.78
PNKP-228ENST00000637325 MAGT1Q9H0U3 335 aa10.2□□□□□ -0.78
PNKP-228ENST00000637325 CSTL1Q9H114 145 aa10.2□□□□□ -0.78
PNKP-228ENST00000637325 FLVCR2Q9UPI3 526 aa10.2□□□□□ -0.78
PNKP-228ENST00000637325 MPTX1A8MV57 137 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 WRBO00258 174 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 SYNGR2O43760 224 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 IFNA21P01568 189 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 FABP1P07148 127 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 PSG1P11464 419 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 IL7P13232 177 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 AP2S1P53680 142 aaPredicted RBP10.19□□□□□ -0.78
PNKP-228ENST00000637325 GAMTQ14353 236 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 C4orf46Q504U0 113 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 LEMD1Q68G75 181 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 OR51G1Q8NGK1 321 aa10.19□□□□□ -0.78
PNKP-228ENST00000637325 RNF183Q96D59 192 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms