RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 RND2P52198 227 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 PAFAH1B2P68402 229 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 TIGITQ495A1 244 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 TRIQKQ629K1 86 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 FAM90A2PQ658T7 463 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 ETFRF1Q6IPR1 90 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 OR1S1Q8NH92 325 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 METTL26Q96S19 204 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 VSIRQ9H7M9 311 aa13.64□□□□□ -0.23
CLN6-214ENST00000636314 IGKV1-17P01599 117 aa13.63□□□□□ -0.23
CLN6-214ENST00000636314 APOHP02749 345 aaPredicted RBP13.63□□□□□ -0.23
CLN6-214ENST00000636314 RBMS2Q15434 407 aaKnown RBP13.63□□□□□ -0.23
CLN6-214ENST00000636314 PRSS54Q6PEW0 395 aa13.63□□□□□ -0.23
CLN6-214ENST00000636314 CENPSQ8N2Z9 138 aa13.63□□□□□ -0.23
CLN6-214ENST00000636314 GBGT1Q8N5D6 347 aa13.63□□□□□ -0.23
CLN6-214ENST00000636314 OR1S2Q8NGQ3 325 aa13.63□□□□□ -0.23
CLN6-214ENST00000636314 TMEM170AQ8WVE7 144 aa13.63□□□□□ -0.23
CLN6-214ENST00000636314 RBKSQ9H477 322 aa13.63□□□□□ -0.23
CLN6-214ENST00000636314 A0A1W2PS18 150 aa13.62□□□□□ -0.23
CLN6-214ENST00000636314 IGLC1P0CG04 106 aa13.62□□□□□ -0.23
CLN6-214ENST00000636314 NPPCP23582 126 aa13.62□□□□□ -0.23
CLN6-214ENST00000636314 CMC4P56277 68 aaPredicted RBP13.62□□□□□ -0.23
CLN6-214ENST00000636314 RPL11P62913 178 aaKnown RBP13.62□□□□□ -0.23
CLN6-214ENST00000636314 NARS2Q96I59 477 aaKnown RBP13.62□□□□□ -0.23
CLN6-214ENST00000636314 U3KQ87 197 aa13.62□□□□□ -0.23
CLN6-214ENST00000636314 DFFBO76075 338 aa13.61□□□□□ -0.23
CLN6-214ENST00000636314 SFT2D2O95562 160 aa13.61□□□□□ -0.23
CLN6-214ENST00000636314 OR10J1P30954 320 aa13.61□□□□□ -0.23
CLN6-214ENST00000636314 PPP1R1AQ13522 171 aa13.61□□□□□ -0.23
CLN6-214ENST00000636314 APRG1Q8IVJ8 170 aa13.61□□□□□ -0.23
CLN6-214ENST00000636314 LRTM2Q8N967 370 aa13.61□□□□□ -0.23
CLN6-214ENST00000636314 ACY3Q96HD9 319 aa13.61□□□□□ -0.23
CLN6-214ENST00000636314 DNASE2O00115 360 aaPredicted RBP13.6□□□□□ -0.23
CLN6-214ENST00000636314 RPL35AP18077 110 aaKnown RBP13.6□□□□□ -0.23
CLN6-214ENST00000636314 BAK1Q16611 211 aa13.6□□□□□ -0.23
CLN6-214ENST00000636314 WFDC3Q8IUB2 231 aa13.6□□□□□ -0.23
CLN6-214ENST00000636314 LILRB2Q8N423 598 aa13.6□□□□□ -0.23
CLN6-214ENST00000636314 Q8WTZ3 238 aa13.6□□□□□ -0.23
CLN6-214ENST00000636314 OVOL2Q9BRP0 275 aa13.6□□□□□ -0.23
CLN6-214ENST00000636314 MS4A6AQ9H2W1 248 aa13.6□□□□□ -0.23
CLN6-214ENST00000636314 MAP6D1Q9H9H5 199 aa13.6□□□□□ -0.23
CLN6-214ENST00000636314 KIR2DL5BA0A0G2JN68 375 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 KIR2DL5BA0A0G2JPC4 375 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 NAP1L6A6NFF2 107 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 UBE2CO00762 179 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 IFNA4P05014 189 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 CRYBB3P26998 211 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 YPEL3P61236 119 aaPredicted RBP13.59□□□□□ -0.23
CLN6-214ENST00000636314 DEFB135Q30KP9 77 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 Q6ZWC4 215 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 KIR2DL5AQ8N109 375 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 STPG3Q8N7X2 389 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 KIR2DL5BQ8NHK3 375 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 NPIPB3Q92617 1050 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 GRAMD2BQ96HH9 432 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 KRTAP17-1Q9BYP8 105 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 TMED3Q9Y3Q3 217 aa13.59□□□□□ -0.23
CLN6-214ENST00000636314 TRAV2A0A0B4J234 112 aa13.58□□□□□ -0.24
CLN6-214ENST00000636314 PITX3O75364 302 aa13.58□□□□□ -0.24
CLN6-214ENST00000636314 SLC25A6P12236 298 aa13.58□□□□□ -0.24
CLN6-214ENST00000636314 P2RY1P47900 373 aa13.58□□□□□ -0.24
CLN6-214ENST00000636314 ATP5IP56385 69 aaPredicted RBP13.58□□□□□ -0.24
CLN6-214ENST00000636314 UBE2MP61081 183 aaKnown RBP13.58□□□□□ -0.24
CLN6-214ENST00000636314 ZNF124Q15973 351 aa13.58□□□□□ -0.24
CLN6-214ENST00000636314 RABAC1Q9UI14 185 aa13.58□□□□□ -0.24
CLN6-214ENST00000636314 TP53TG1Q9Y2A0 90 aa13.58□□□□□ -0.24
CLN6-214ENST00000636314 FRAS1Q86XX4 4008 aa13.58□□□□□ -0.24
CLN6-214ENST00000636314 LINC00854A0A1B0GVQ3 168 aa13.57□□□□□ -0.24
CLN6-214ENST00000636314 FAM90A26D6RGX4 464 aa13.57□□□□□ -0.24
CLN6-214ENST00000636314 SPRY2O43597 315 aa13.57□□□□□ -0.24
CLN6-214ENST00000636314 NDUFB6O95139 128 aa13.57□□□□□ -0.24
CLN6-214ENST00000636314 IL4P05112 153 aa13.57□□□□□ -0.24
CLN6-214ENST00000636314 HNRNPCP07910 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLN6-214ENST00000636314 IAPPP10997 89 aa13.57□□□□□ -0.24
CLN6-214ENST00000636314 STXBP6Q8NFX7 210 aa13.57□□□□□ -0.24
CLN6-214ENST00000636314 NDUFA13Q9P0J0 144 aa13.57□□□□□ -0.24
CLN6-214ENST00000636314 CENPXA8MT69 81 aa13.56□□□□□ -0.24
CLN6-214ENST00000636314 MED6O75586 246 aa13.56□□□□□ -0.24
CLN6-214ENST00000636314 TOMM40O96008 361 aa13.56□□□□□ -0.24
CLN6-214ENST00000636314 HOXB5P09067 269 aa13.56□□□□□ -0.24
CLN6-214ENST00000636314 EIF2B2P49770 351 aaKnown RBP13.56□□□□□ -0.24
CLN6-214ENST00000636314 SLC35E1Q96K37 410 aa13.56□□□□□ -0.24
CLN6-214ENST00000636314 SDHCQ99643 169 aaPredicted RBP13.56□□□□□ -0.24
CLN6-214ENST00000636314 RD3LP0DJH9 198 aa13.55□□□□□ -0.24
CLN6-214ENST00000636314 DEFB131AP59861 70 aa13.55□□□□□ -0.24
CLN6-214ENST00000636314 RAB11AP62491 216 aa13.55□□□□□ -0.24
CLN6-214ENST00000636314 USF2Q15853 346 aaPredicted RBP13.55□□□□□ -0.24
CLN6-214ENST00000636314 FAM24BQ8N5W8 94 aa13.55□□□□□ -0.24
CLN6-214ENST00000636314 LINC00476Q8WZB0 136 aa13.55□□□□□ -0.24
CLN6-214ENST00000636314 CIB3Q96Q77 187 aaPredicted RBP13.55□□□□□ -0.24
CLN6-214ENST00000636314 C7orf50Q9BRJ6 194 aaKnown RBP13.55□□□□□ -0.24
CLN6-214ENST00000636314 PAIP2BQ9ULR5 123 aaKnown RBP13.55□□□□□ -0.24
CLN6-214ENST00000636314 C9orf170A2RU37 121 aa13.54□□□□□ -0.24
CLN6-214ENST00000636314 HELTA6NFD8 242 aa13.54□□□□□ -0.24
CLN6-214ENST00000636314 ZFP92A6NM28 416 aa13.54□□□□□ -0.24
CLN6-214ENST00000636314 LY6G6CO95867 125 aa13.54□□□□□ -0.24
CLN6-214ENST00000636314 IL7P13232 177 aa13.54□□□□□ -0.24
CLN6-214ENST00000636314 GPX4P36969 197 aaPredicted RBP13.54□□□□□ -0.24
CLN6-214ENST00000636314 GGNBP1Q5YKI7 109 aa13.54□□□□□ -0.24
CLN6-214ENST00000636314 LEMD1Q68G75 181 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms