RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 A0A0G2JRQ6 117 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 OR4C46A6NHA9 309 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 CENPXA8MT69 81 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 CD5P06127 495 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 P0C879 139 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 SULT1A3P0DMM9 295 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 SULT1A4P0DMN0 295 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 RNASE2P10153 161 aaKnown RBP4.8□□□□□ -1.64
TCF4-249ENST00000625716 FCGR2BP31994 310 aaPredicted RBP4.8□□□□□ -1.64
TCF4-249ENST00000625716 CCR6P51684 374 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 PAFAH1B2P68402 229 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 KLF9Q13886 244 aaPredicted RBP4.8□□□□□ -1.64
TCF4-249ENST00000625716 TMEM187Q14656 261 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 ETFRF1Q6IPR1 90 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 Q6ZRM9 215 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 CCDC190Q86UF4 302 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 TMEM116Q8NCL8 245 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 OR1S1Q8NH92 325 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 LHFPL5Q8TAF8 219 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 TMEM230Q96A57 120 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 NARS2Q96I59 477 aaKnown RBP4.8□□□□□ -1.64
TCF4-249ENST00000625716 SPAG8Q99932 426 aaPredicted RBP4.8□□□□□ -1.64
TCF4-249ENST00000625716 SLC25A21Q9BQT8 299 aaPredicted RBP4.8□□□□□ -1.64
TCF4-249ENST00000625716 TM2D3Q9BRN9 247 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 RBM38Q9H0Z9 239 aaKnown RBP4.8□□□□□ -1.64
TCF4-249ENST00000625716 SRD5A3Q9H8P0 318 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 SHPKQ9UHJ6 478 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 V9GYH0 126 aa4.8□□□□□ -1.64
TCF4-249ENST00000625716 IGHV7-4-1A0A0J9YVY3 117 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 NAP1L6A6NFF2 107 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 C3orf84H3BNL1 204 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 TSPAN4O14817 238 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 NXPH3O95157 252 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 TMEM50AO95807 157 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 IFNA10P01566 189 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 NPPCP23582 126 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 CMC4P56277 68 aaPredicted RBP4.79□□□□□ -1.64
TCF4-249ENST00000625716 SMCO1Q147U7 214 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 C2orf83Q53S99 150 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 TMEM128Q5BJH2 165 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 ZNF600Q6ZNG1 722 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 LYZL2Q7Z4W2 148 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 SLC24A4Q8NFF2 622 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 RNASEH2CQ8TDP1 164 aaKnown RBP4.79□□□□□ -1.64
TCF4-249ENST00000625716 TRIM63Q969Q1 353 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 RHPN1-AS1Q9BWJ2 59 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 TMEM231Q9H6L2 316 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 SMPXQ9UHP9 88 aa4.79□□□□□ -1.64
TCF4-249ENST00000625716 IGKV3-7A0A075B6H7 116 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 IGHV3OR16-13A0A075B7E8 117 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 LOC102724200A0A096LPH7 203 aaPredicted RBP4.78□□□□□ -1.64
TCF4-249ENST00000625716 IGHV3-49A0A0A0MS15 119 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 IGHV3-74A0A0B4J1X5 117 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 A0A1B0GU03 582 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 LINC00854A0A1B0GVQ3 168 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 DUXBA0A1W2PPF3 345 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 A0A1W2PS18 150 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 DNASE2O00115 360 aaPredicted RBP4.78□□□□□ -1.64
TCF4-249ENST00000625716 CHEK1O14757 476 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 CLN5O75503 358 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 SLC25A4P12235 298 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 LYL1P12980 280 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 NPY1RP25929 384 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 TFPI2P48307 235 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 ATP5IP56385 69 aaPredicted RBP4.78□□□□□ -1.64
TCF4-249ENST00000625716 SUPT4H1P63272 117 aaKnown RBP4.78□□□□□ -1.64
TCF4-249ENST00000625716 RPP30P78346 268 aaKnown RBP4.78□□□□□ -1.64
TCF4-249ENST00000625716 TNFRSF9Q07011 255 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 RBMS2Q15434 407 aaKnown RBP4.78□□□□□ -1.64
TCF4-249ENST00000625716 ZNF79Q15937 498 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 AARDQ4LEZ3 155 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 TOMM20LQ6UXN7 152 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 LINC00299Q6ZSB3 139 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 CENPSQ8N2Z9 138 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 OR4X1Q8NH49 305 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 MUC7Q8TAX7 377 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 DTD1Q8TEA8 209 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 Q8WTZ3 238 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 GRAMD2BQ96HH9 432 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 OR10C1Q96KK4 312 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 METTL26Q96S19 204 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 RNF2Q99496 336 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 GGTLC1Q9BX51 225 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 WFDC10AQ9H1F0 79 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 C11orf21Q9P2W6 132 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 UBQLN2Q9UHD9 624 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 PUS1Q9Y606 427 aaKnown RBP eCLIP4.78□□□□□ -1.64
TCF4-249ENST00000625716 U3KQ87 197 aa4.78□□□□□ -1.64
TCF4-249ENST00000625716 SORL1Q92673 2214 aa4.77□□□□□ -1.65
TCF4-249ENST00000625716 RBMY1BA6NDE4 496 aaKnown RBP4.77□□□□□ -1.65
TCF4-249ENST00000625716 RBMY1EA6NEQ0 496 aaKnown RBP4.77□□□□□ -1.65
TCF4-249ENST00000625716 MED6O75586 246 aa4.77□□□□□ -1.65
TCF4-249ENST00000625716 SFT2D2O95562 160 aa4.77□□□□□ -1.65
TCF4-249ENST00000625716 IFNA4P05014 189 aa4.77□□□□□ -1.65
TCF4-249ENST00000625716 RBMY1DP0C7P1 496 aaKnown RBP4.77□□□□□ -1.65
TCF4-249ENST00000625716 OR10J1P30954 320 aa4.77□□□□□ -1.65
TCF4-249ENST00000625716 EIF2B2P49770 351 aaKnown RBP4.77□□□□□ -1.65
TCF4-249ENST00000625716 RND2P52198 227 aa4.77□□□□□ -1.65
TCF4-249ENST00000625716 APOC4P55056 127 aa4.77□□□□□ -1.65
TCF4-249ENST00000625716 UBE2MP61081 183 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms