RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 CDKN1AP38936 164 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 Q6ZS49 121 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 PILRBQ9UKJ0 227 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 COL6A6A6NMZ7 2263 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 FAM106CPP0CH98 169 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 KLF17Q5JT82 389 aaPredicted RBP7.44□□□□□ -1.22
VCL-206ENST00000623461 OR13C6PQ8NH95 151 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 LEAP2Q969E1 77 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 IGHV3-72A0A0B4J1Y9 119 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 ZNF815PA8K554 130 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 LILRA1O75019 489 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 YPEL3P61236 119 aaPredicted RBP7.44□□□□□ -1.22
VCL-206ENST00000623461 GNG5P63218 68 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 FBXL7Q9UJT9 491 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 SPEM2Q0P670 501 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 NUP35Q8NFH5 326 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 ERG28Q9UKR5 140 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 CNOT1A5YKK6 2376 aaKnown RBP7.44□□□□□ -1.22
VCL-206ENST00000623461 IGHV2-26A0A0B4J1V2 119 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 CGB1A6NKQ9 187 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 TGFAP01135 160 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 PEAR1Q5VY43 1037 aaPredicted RBP7.44□□□□□ -1.22
VCL-206ENST00000623461 DPH3Q96FX2 82 aa7.44□□□□□ -1.22
VCL-206ENST00000623461 FAM231BA6NCW3 169 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 CCL4P13236 92 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 HGFACQ04756 655 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 CD69Q07108 199 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 DEFB124Q8NES8 71 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 OR13A1Q8NGR1 328 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 ANAPC10Q9UM13 185 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 ANAPC1Q9H1A4 1944 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 ACACAQ13085 2346 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
VCL-206ENST00000623461 TGFBR3LH3BV60 316 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 IGHV4-39P01824 125 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 PSG3Q16557 428 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 CLEC7AQ9BXN2 247 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 TMEM74BQ9NUR3 256 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 F8W1H4 67 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 RAMP3O60896 148 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 PLNP26678 52 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 PRCDQ00LT1 54 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 K7EP13 123 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 PSG8Q9UQ74 426 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 RLFQ13129 1914 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 CTSBP07858 339 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 NPPCP23582 126 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 GATA2P23769 480 aaPredicted RBP7.43□□□□□ -1.22
VCL-206ENST00000623461 ATXN8Q156A1 80 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 ZNF56Q15929 161 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 ARPC1AQ92747 370 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 TIMP4Q99727 224 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 VKORC1Q9BQB6 163 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 FAM159AQ6UWV7 190 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 DUSP15Q9H1R2 295 aaPredicted RBP7.43□□□□□ -1.22
VCL-206ENST00000623461 MOB4Q9Y3A3 225 aa7.43□□□□□ -1.22
VCL-206ENST00000623461 K7EP34 96 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 ZNF319Q9P2F9 582 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 TRBV6-6A0A0A6YYG2 114 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 PRR33A8MZF0 331 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 Q6ZWC4 215 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 LYPD6BQ8NI32 183 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 GFRA4Q9GZZ7 299 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 FSCN3Q9NQT6 498 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 CACNA1BQ00975 2339 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 AHRRA9YTQ3 701 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 C16orf97H3BN30 126 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 PVRIGQ6DKI7 326 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 SHISA5Q8N114 240 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 MGST2Q99735 147 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 RFNGQ9Y644 331 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 NUP210Q8TEM1 1887 aaPredicted RBP7.42□□□□□ -1.22
VCL-206ENST00000623461 IQCF6A8MYZ5 107 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 FNDC10F2Z333 226 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 MESP2Q0VG99 397 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 PCOLCEQ15113 449 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 ARFGEF3Q5TH69 2177 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 EEF1AKMT3Q96AZ1 226 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 NAA38Q9BRA0 125 aaKnown RBP7.42□□□□□ -1.22
VCL-206ENST00000623461 IGKV3-7A0A075B6H7 116 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 IGLV3-32A0A0A0MS00 114 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 KIR2DL5BA0A0G2JN68 375 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 KIR2DL5BA0A0G2JPC4 375 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 GHRHP01286 108 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 IGHV3-48P01763 117 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 HTN1P15515 57 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 KIR2DL5AQ8N109 375 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 WBP1Q96G27 269 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 NPFFO15130 113 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 CELA2AP08217 269 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 PAX1P15863 534 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 PIMREGQ9BSJ6 248 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 FOXA2Q9Y261 457 aaPredicted RBP7.42□□□□□ -1.22
VCL-206ENST00000623461 KIAA1671Q9BY89 1806 aa7.42□□□□□ -1.22
VCL-206ENST00000623461 COX6A1P12074 109 aa7.41□□□□□ -1.22
VCL-206ENST00000623461 LAGE3Q14657 143 aa7.41□□□□□ -1.22
VCL-206ENST00000623461 MRPS18CQ9Y3D5 142 aaKnown RBP7.41□□□□□ -1.22
VCL-206ENST00000623461 CD33P20138 364 aa7.41□□□□□ -1.22
VCL-206ENST00000623461 CHCHD2Q9Y6H1 151 aaPredicted RBP7.41□□□□□ -1.22
VCL-206ENST00000623461 PYYP10082 97 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms