RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 LGALS7P47929 136 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 DEFB1P60022 68 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 DEFB112Q30KQ8 113 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 ACOT6Q3I5F7 207 aaPredicted RBP8.34□□□□□ -1.07
VPS11-208ENST00000621676 TMEM167AQ8TBQ9 72 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 MUC21A0A0G2JKD1 596 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 MUC21A0A140T8X8 626 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 SCO2A0A1W2PP80 73 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 C7orf77A4D0Y5 90 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 PCP4L1A6NKN8 68 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 KRBOX1C9JBD0 128 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 FAM90A26D6RGX4 464 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 NDUFB8O95169 186 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 AMY1AP04745 511 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 IL4P05112 153 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 CRYBB3P26998 211 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 TCL1AP56279 114 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 CD69Q07108 199 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 ICAM4Q14773 271 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 PDZD11Q5EBL8 140 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 MUC21Q5SSG8 566 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 LINC00305Q7Z4B0 112 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 SAT2Q96F10 170 aaPredicted RBP8.34□□□□□ -1.07
VPS11-208ENST00000621676 KLK15Q9H2R5 256 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 TRAV8-1A0A0A6YYK1 113 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 A0A1W2PRX2 142 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 PSG1P11464 419 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 PLA2G2AP14555 144 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 AKR1D1P51857 326 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 LY6G5BQ8NDX9 201 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 ARPC1AQ92747 370 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 SERTAD4Q9NUC0 356 aa8.34□□□□□ -1.07
VPS11-208ENST00000621676 CLEC3BP05452 202 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 TFPI2P48307 235 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 COMPP49747 757 aaPredicted RBP8.33□□□□□ -1.08
VPS11-208ENST00000621676 MRGPRG-AS1Q2M3A8 158 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 SVBPQ8N300 66 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 SCRT1Q9BWW7 348 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 SLC35B3Q9H1N7 401 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 CA1P00915 261 aaPredicted RBP8.33□□□□□ -1.08
VPS11-208ENST00000621676 PSMB3P49720 205 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 UBE2L3P68036 154 aaKnown RBP8.33□□□□□ -1.08
VPS11-208ENST00000621676 DLK1P80370 383 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 DHRS7BQ6IAN0 325 aaPredicted RBP8.33□□□□□ -1.08
VPS11-208ENST00000621676 SLC35E3Q7Z769 313 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 WFDC3Q8IUB2 231 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 TOLLIPQ9H0E2 274 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 FKBP11Q9NYL4 201 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 FBXL7Q9UJT9 491 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 NOTCH1P46531 2555 aa8.33□□□□□ -1.08
VPS11-208ENST00000621676 SUB1P53999 127 aaKnown RBP eCLIP8.32□□□□□ -1.08
VPS11-208ENST00000621676 FAM3BP58499 235 aaPredicted RBP8.32□□□□□ -1.08
VPS11-208ENST00000621676 PAX5Q02548 391 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 C15orf32Q32M92 178 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 CFHR4Q92496 578 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 TRBV12-3P01733 135 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 BRS3P32247 399 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 EXOC3-AS1Q8N2X6 119 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 ZNF114Q8NC26 417 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 CLRN3Q8NCR9 226 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 BEND2Q8NDZ0 799 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 LINC00574Q9H8X3 128 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 YTHDF2Q9Y5A9 579 aaKnown RBP8.32□□□□□ -1.08
VPS11-208ENST00000621676 BCL2P10415 239 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 GBGT1Q8N5D6 347 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 CHRDL1Q9BU40 450 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 TPPP3Q9BW30 176 aa8.32□□□□□ -1.08
VPS11-208ENST00000621676 VWFP04275 2813 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 IGHV7-81A0A0B4J1V7 117 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 B4DSR2 109 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 TEX22C9J3V5 150 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 ZNF705DP0CH99 300 aaPredicted RBP8.31□□□□□ -1.08
VPS11-208ENST00000621676 ZNF705BP0CI00 300 aaPredicted RBP8.31□□□□□ -1.08
VPS11-208ENST00000621676 RHOGP84095 191 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 TMEM249Q2WGJ8 235 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 NIPSNAP3BQ9BS92 247 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 SEBOXQ9HB31 216 aaPredicted RBP8.31□□□□□ -1.08
VPS11-208ENST00000621676 TENM1Q9UKZ4 2725 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 IGHV1-69DA0A0B4J2H0 117 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 M0R3E3 92 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 IGHV1-69P01742 117 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 RD3LP0DJH9 198 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 RPS10P46783 165 aaKnown RBP8.31□□□□□ -1.08
VPS11-208ENST00000621676 UBE2E1P51965 193 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 CD81P60033 236 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 TCTEX1D1Q8N7M0 179 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 OR11H6Q8NGC7 330 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 ELOVL1Q9BW60 279 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 KPTNQ9Y664 436 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 CTXND1A0A1B0GTU2 59 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 SLC17A3O00476 420 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 SRP19P09132 144 aaKnown RBP8.31□□□□□ -1.08
VPS11-208ENST00000621676 SRP14P37108 136 aaKnown RBP8.31□□□□□ -1.08
VPS11-208ENST00000621676 C10orf113Q5VZT2 155 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 Q8N9W7 124 aa8.31□□□□□ -1.08
VPS11-208ENST00000621676 AGRNO00468 2067 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 LY6LH3BQJ8 138 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 EDN2P20800 178 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 NPPCP23582 126 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 HLA-DMBP28068 263 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms