RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 OR11H2Q8NH07 326 aa17.62■□□□□ 0.41
ATXN3-253ENST00000621269 SCGB3A2Q96PL1 93 aa17.62■□□□□ 0.41
ATXN3-253ENST00000621269 EPPK1P58107 5090 aaKnown RBP17.62■□□□□ 0.41
ATXN3-253ENST00000621269 ANKRD20A5PA0PJZ0 165 aa17.61■□□□□ 0.41
ATXN3-253ENST00000621269 GSTZ1O43708 216 aaPredicted RBP17.61■□□□□ 0.41
ATXN3-253ENST00000621269 NOL3O60936 208 aaKnown RBP17.61■□□□□ 0.41
ATXN3-253ENST00000621269 IGKV1-17P01599 117 aa17.61■□□□□ 0.41
ATXN3-253ENST00000621269 FAM24BQ8N5W8 94 aa17.61■□□□□ 0.41
ATXN3-253ENST00000621269 Q8WTZ3 238 aa17.61■□□□□ 0.41
ATXN3-253ENST00000621269 SULT1A3P0DMM9 295 aa17.6■□□□□ 0.41
ATXN3-253ENST00000621269 SULT1A4P0DMN0 295 aa17.6■□□□□ 0.41
ATXN3-253ENST00000621269 EIF2B2P49770 351 aaKnown RBP17.6■□□□□ 0.41
ATXN3-253ENST00000621269 RND2P52198 227 aa17.6■□□□□ 0.41
ATXN3-253ENST00000621269 TMEM187Q14656 261 aa17.6■□□□□ 0.41
ATXN3-253ENST00000621269 ETFRF1Q6IPR1 90 aa17.6■□□□□ 0.41
ATXN3-253ENST00000621269 PRSS54Q6PEW0 395 aa17.6■□□□□ 0.41
ATXN3-253ENST00000621269 NOXA1Q86UR1 476 aa17.6■□□□□ 0.41
ATXN3-253ENST00000621269 IL22RA2Q969J5 263 aa17.6■□□□□ 0.41
ATXN3-253ENST00000621269 MCUBQ9NWR8 336 aa17.6■□□□□ 0.41
ATXN3-253ENST00000621269 PLECQ15149 4684 aaKnown RBP17.59■□□□□ 0.41
ATXN3-253ENST00000621269 NXPH3O95157 252 aa17.59■□□□□ 0.41
ATXN3-253ENST00000621269 OR10J1P30954 320 aa17.59■□□□□ 0.41
ATXN3-253ENST00000621269 PHLDA1Q8WV24 401 aaPredicted RBP17.59■□□□□ 0.41
ATXN3-253ENST00000621269 FABP12A6NFH5 140 aa17.58■□□□□ 0.4
ATXN3-253ENST00000621269 K7EQG2 157 aa17.58■□□□□ 0.4
ATXN3-253ENST00000621269 IGLC1P0CG04 106 aa17.58■□□□□ 0.4
ATXN3-253ENST00000621269 NPY1RP25929 384 aa17.58■□□□□ 0.4
ATXN3-253ENST00000621269 YPEL3P61236 119 aaPredicted RBP17.58■□□□□ 0.4
ATXN3-253ENST00000621269 RBMS2Q15434 407 aaKnown RBP17.58■□□□□ 0.4
ATXN3-253ENST00000621269 C11orf68Q9H3H3 251 aaKnown RBP17.58■□□□□ 0.4
ATXN3-253ENST00000621269 HNRNPCP07910 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
ATXN3-253ENST00000621269 AKR1C4P17516 323 aa17.57■□□□□ 0.4
ATXN3-253ENST00000621269 NMSQ5H8A3 153 aa17.57■□□□□ 0.4
ATXN3-253ENST00000621269 C11orf45Q8TAV5 145 aa17.57■□□□□ 0.4
ATXN3-253ENST00000621269 MFFQ9GZY8 342 aa17.57■□□□□ 0.4
ATXN3-253ENST00000621269 PRR13Q9NZ81 148 aa17.57■□□□□ 0.4
ATXN3-253ENST00000621269 HELTA6NFD8 242 aa17.56■□□□□ 0.4
ATXN3-253ENST00000621269 IFNA10P01566 189 aa17.56■□□□□ 0.4
ATXN3-253ENST00000621269 TNFSF8P32971 234 aa17.56■□□□□ 0.4
ATXN3-253ENST00000621269 CCR6P51684 374 aa17.56■□□□□ 0.4
ATXN3-253ENST00000621269 SLIRPQ9GZT3 109 aaKnown RBP17.56■□□□□ 0.4
ATXN3-253ENST00000621269 ALMS1Q8TCU4 4167 aa17.56■□□□□ 0.4
ATXN3-253ENST00000621269 ZNF688P0C7X2 276 aa17.55■□□□□ 0.4
ATXN3-253ENST00000621269 ANXA3P12429 323 aa17.55■□□□□ 0.4
ATXN3-253ENST00000621269 AP2S1P53680 142 aaPredicted RBP17.55■□□□□ 0.4
ATXN3-253ENST00000621269 DCANP1Q8TF63 244 aa17.55■□□□□ 0.4
ATXN3-253ENST00000621269 TMEM170AQ8WVE7 144 aa17.55■□□□□ 0.4
ATXN3-253ENST00000621269 NPIPB3Q92617 1050 aa17.55■□□□□ 0.4
ATXN3-253ENST00000621269 ACY3Q96HD9 319 aa17.55■□□□□ 0.4
ATXN3-253ENST00000621269 U3KQ87 197 aa17.55■□□□□ 0.4
ATXN3-253ENST00000621269 U3KQE9 123 aa17.55■□□□□ 0.4
ATXN3-253ENST00000621269 A0A0B4J2A0 478 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 H3BMQ9 156 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 IFNA4P05014 189 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 IL4P05112 153 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 NANOS2P60321 138 aaKnown RBP17.54■□□□□ 0.4
ATXN3-253ENST00000621269 DHRS2Q13268 280 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 SMCO1Q147U7 214 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 TMEM41BQ5BJD5 291 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 MORN3Q6PF18 240 aaPredicted RBP17.54■□□□□ 0.4
ATXN3-253ENST00000621269 C16orf54Q6UWD8 224 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 TRPT1Q86TN4 253 aaKnown RBP17.54■□□□□ 0.4
ATXN3-253ENST00000621269 MCFD2Q8NI22 146 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 FBXL17Q9UF56 701 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 SHPKQ9UHJ6 478 aa17.54■□□□□ 0.4
ATXN3-253ENST00000621269 DEFB4AO15263 64 aa17.53■□□□□ 0.4
ATXN3-253ENST00000621269 RD3LP0DJH9 198 aa17.53■□□□□ 0.4
ATXN3-253ENST00000621269 SPP1P10451 314 aa17.53■□□□□ 0.4
ATXN3-253ENST00000621269 SRPXP78539 464 aa17.53■□□□□ 0.4
ATXN3-253ENST00000621269 LYZL2Q7Z4W2 148 aa17.53■□□□□ 0.4
ATXN3-253ENST00000621269 LGI3Q8N145 548 aa17.53■□□□□ 0.4
ATXN3-253ENST00000621269 DTD1Q8TEA8 209 aa17.53■□□□□ 0.4
ATXN3-253ENST00000621269 SOSTQ9BQB4 213 aa17.53■□□□□ 0.4
ATXN3-253ENST00000621269 HSPB7Q9UBY9 170 aa17.53■□□□□ 0.4
ATXN3-253ENST00000621269 KNCNA6PVL3 124 aa17.52■□□□□ 0.4
ATXN3-253ENST00000621269 FAUP35544 74 aaKnown RBP17.52■□□□□ 0.4
ATXN3-253ENST00000621269 GLMPQ8WWB7 406 aa17.52■□□□□ 0.4
ATXN3-253ENST00000621269 RBKSQ9H477 322 aa17.52■□□□□ 0.4
ATXN3-253ENST00000621269 PIGBOS1A0A0B4J2F0 54 aa17.51■□□□□ 0.39
ATXN3-253ENST00000621269 TOMM40O96008 361 aa17.51■□□□□ 0.39
ATXN3-253ENST00000621269 SUPT4H1P63272 117 aaKnown RBP17.51■□□□□ 0.39
ATXN3-253ENST00000621269 USF2Q15853 346 aaPredicted RBP17.51■□□□□ 0.39
ATXN3-253ENST00000621269 ACTL10Q5JWF8 245 aa17.51■□□□□ 0.39
ATXN3-253ENST00000621269 PSMG4Q5JS54 123 aa17.5■□□□□ 0.39
ATXN3-253ENST00000621269 OR1S1Q8NH92 325 aa17.5■□□□□ 0.39
ATXN3-253ENST00000621269 BIRC6Q9NR09 4857 aa17.5■□□□□ 0.39
ATXN3-253ENST00000621269 ATP5IP56385 69 aaPredicted RBP17.49■□□□□ 0.39
ATXN3-253ENST00000621269 AP3S2P59780 193 aa17.49■□□□□ 0.39
ATXN3-253ENST00000621269 SNRPD3P62318 126 aaKnown RBP17.49■□□□□ 0.39
ATXN3-253ENST00000621269 KLF9Q13886 244 aaPredicted RBP17.49■□□□□ 0.39
ATXN3-253ENST00000621269 PYDC2Q56P42 97 aa17.49■□□□□ 0.39
ATXN3-253ENST00000621269 TMED4Q7Z7H5 227 aa17.49■□□□□ 0.39
ATXN3-253ENST00000621269 GIG44P09565 113 aaPredicted RBP17.48■□□□□ 0.39
ATXN3-253ENST00000621269 PSG1P11464 419 aa17.48■□□□□ 0.39
ATXN3-253ENST00000621269 SIGLEC15Q6ZMC9 328 aa17.48■□□□□ 0.39
ATXN3-253ENST00000621269 TOMM5Q8N4H5 51 aa17.48■□□□□ 0.39
ATXN3-253ENST00000621269 RAB40CQ96S21 281 aa17.48■□□□□ 0.39
ATXN3-253ENST00000621269 BUB3O43684 328 aa17.47■□□□□ 0.39
ATXN3-253ENST00000621269 OR51G1Q8NGK1 321 aa17.47■□□□□ 0.39
ATXN3-253ENST00000621269 C2CD4CQ8TF44 421 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms