RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 GLMPQ8WWB7 406 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 BMPERQ8N8U9 685 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 RNASE6Q93091 150 aaKnown RBP6.91□□□□□ -1.3
ALMS1-208ENST00000620466 MGST2Q99735 147 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 COL4A4P53420 1690 aaPredicted RBP6.91□□□□□ -1.3
ALMS1-208ENST00000620466 PARD6GQ9BYG4 376 aaPredicted RBP6.91□□□□□ -1.3
ALMS1-208ENST00000620466 LIME1Q9H400 295 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 IGKV3D-20A0A0C4DH25 116 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 MUC21A0A0G2JKD1 596 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 MUC21A0A140T8X8 626 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 RBMY1BA6NDE4 496 aaKnown RBP6.91□□□□□ -1.3
ALMS1-208ENST00000620466 RBMY1EA6NEQ0 496 aaKnown RBP6.91□□□□□ -1.3
ALMS1-208ENST00000620466 RBMY1DP0C7P1 496 aaKnown RBP6.91□□□□□ -1.3
ALMS1-208ENST00000620466 RBMY1A1P0DJD3 496 aaKnown RBP6.91□□□□□ -1.3
ALMS1-208ENST00000620466 RBMY1CP0DJD4 496 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 CCL3L1P16619 93 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 PAPPA-AS1Q5QFB9 102 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 MUC21Q5SSG8 566 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 TEX38Q6PEX7 206 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 DERL1Q9BUN8 251 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 C11orf68Q9H3H3 251 aaKnown RBP6.91□□□□□ -1.3
ALMS1-208ENST00000620466 NRN1Q9NPD7 142 aa6.91□□□□□ -1.3
ALMS1-208ENST00000620466 THBDP07204 575 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 SMIM13P0DJ93 91 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 CA7P43166 264 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 MEF2CQ06413 473 aaPredicted RBP6.9□□□□□ -1.3
ALMS1-208ENST00000620466 LY6DQ14210 128 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 CACNG8Q8WXS5 425 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 ST6GALNAC6Q969X2 333 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 NDUFA3O95167 84 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 STAG3L3P0CL85 134 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 FOXF2Q12947 444 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 Q9H3A6 140 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 TOMM7Q9P0U1 55 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 PYYP10082 97 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 PRCDQ00LT1 54 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 Q6ZRM9 215 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 NUDT10Q8NFP7 164 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 NUDT11Q96G61 164 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 PRELID3AQ96N28 172 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 C18orf15Q96N68 181 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 SCGB3A1Q96QR1 104 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 GGTLC1Q9BX51 225 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 IGHV3OR16-8A0A075B7F1 116 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 TRAV3A0A0B4J244 114 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 IGKV1-6A0A0C4DH72 117 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 ZNF815PA8K554 130 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 TIMP3P35625 211 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 TTC32Q5I0X7 151 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 PYY3Q5JQD4 70 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 FAM90A2PQ658T7 463 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 FAM71F2Q6NXP2 309 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 VGLL1Q99990 258 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 C21orf62Q9NYP8 219 aa6.9□□□□□ -1.3
ALMS1-208ENST00000620466 TMEM167AQ8TBQ9 72 aa6.9□□□□□ -1.31
ALMS1-208ENST00000620466 SSBP4Q9BWG4 385 aaPredicted RBP6.9□□□□□ -1.31
ALMS1-208ENST00000620466 FREM3P0C091 2139 aa6.9□□□□□ -1.31
ALMS1-208ENST00000620466 KIAA1549LQ6ZVL6 1849 aa6.9□□□□□ -1.31
ALMS1-208ENST00000620466 LINC00473A8K010 186 aa6.9□□□□□ -1.31
ALMS1-208ENST00000620466 HIGD1CA8MV81 97 aa6.9□□□□□ -1.31
ALMS1-208ENST00000620466 ZNF688P0C7X2 276 aa6.9□□□□□ -1.31
ALMS1-208ENST00000620466 OR10J3Q5JRS4 329 aa6.9□□□□□ -1.31
ALMS1-208ENST00000620466 LEMD1Q68G75 181 aa6.9□□□□□ -1.31
ALMS1-208ENST00000620466 FOXC2Q99958 501 aa6.9□□□□□ -1.31
ALMS1-208ENST00000620466 GNB1LQ9BYB4 327 aa6.9□□□□□ -1.31
ALMS1-208ENST00000620466 LINC00205P59089 165 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 PRSS22Q9GZN4 317 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 PROK2Q9HC23 129 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 OSTCQ9NRP0 149 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 ASCC3Q8N3C0 2202 aaKnown RBP6.89□□□□□ -1.31
ALMS1-208ENST00000620466 LINC01551Q86U37 167 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 OR5AN1Q8NGI8 311 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 TRAV5A0A0B4J249 113 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 CRPP02741 224 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 NPFFR1Q9GZQ6 430 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 APOHP02749 345 aaPredicted RBP6.89□□□□□ -1.31
ALMS1-208ENST00000620466 CNTFRP26992 372 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 OR10W1Q8NGF6 305 aa6.89□□□□□ -1.31
ALMS1-208ENST00000620466 MRPL16Q9NX20 251 aaKnown RBP6.89□□□□□ -1.31
ALMS1-208ENST00000620466 ARID1AO14497 2285 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 C17orf100A8MU93 164 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 NBR2O15453 112 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 ZNF414Q96IQ9 312 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 COQ2Q96H96 371 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 ARHGEF17Q96PE2 2063 aaPredicted RBP6.88□□□□□ -1.31
ALMS1-208ENST00000620466 CD7P09564 240 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 CD59P13987 128 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 FOXL1Q12952 345 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 LHFPL4Q7Z7J7 247 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 SOX21Q9Y651 276 aaPredicted RBP6.88□□□□□ -1.31
ALMS1-208ENST00000620466 LY6G6EA0A0G2JKS1 128 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 ZNF585BQ52M93 769 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 DMRTA1Q5VZB9 504 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 SEPSECSQ9HD40 501 aaKnown RBP6.88□□□□□ -1.31
ALMS1-208ENST00000620466 U3KQA8 63 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 CA1P00915 261 aaPredicted RBP6.88□□□□□ -1.31
ALMS1-208ENST00000620466 IGHV1-46P01743 117 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 SELLP14151 372 aa6.88□□□□□ -1.31
ALMS1-208ENST00000620466 MYOD1P15172 320 aa6.87□□□□□ -1.31
ALMS1-208ENST00000620466 C3orf36Q3SXR2 165 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms