RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 A0A1B0GUT8 65 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 H0YJW9 148 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 ZNF738Q8NE65 137 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 PLCE1Q9P212 2302 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 IGHV2-5P01817 119 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 HLA-DRB1P01911 266 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 SAPCD1Q5SSQ6 148 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 TCF24Q7RTU0 167 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 NUP37Q8NFH4 326 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 TNFRSF14Q92956 283 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 TCF21O43680 179 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 SLC25A34Q6PIV7 304 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 RBPMS2Q6ZRY4 209 aaKnown RBP11.38□□□□□ -0.59
CNOT3-210ENST00000618939 TMEM256Q8N2U0 113 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 A0A0G2JNJ9 132 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 CGB1A6NKQ9 187 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 IGHV1-8P0DP01 117 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 RPRMLQ8N4K4 120 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 C16orf92Q96LL3 132 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 SSBP4Q9BWG4 385 aaPredicted RBP11.38□□□□□ -0.59
CNOT3-210ENST00000618939 OTORQ9NRC9 128 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 Q9UFV3 132 aa11.38□□□□□ -0.59
CNOT3-210ENST00000618939 ZFHX2Q9C0A1 2572 aaPredicted RBP11.37□□□□□ -0.59
CNOT3-210ENST00000618939 NBR2O15453 112 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 TCTAP57738 103 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 LOXL3P58215 753 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 ADIPOQQ15848 244 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 C15orf65H3BRN8 121 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 IGLV1-44P01699 117 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 IGHV3-23P01764 117 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 RNASE2P10153 161 aaKnown RBP11.37□□□□□ -0.59
CNOT3-210ENST00000618939 PRSS8Q16651 343 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 MLANAQ16655 118 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 NEU4Q8WWR8 484 aaPredicted RBP11.37□□□□□ -0.59
CNOT3-210ENST00000618939 VKORC1Q9BQB6 163 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 LY96Q9Y6Y9 160 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 RAB9AP51151 201 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 ARPC1AQ92747 370 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 PTPRSQ13332 1948 aa11.37□□□□□ -0.59
CNOT3-210ENST00000618939 TECTAO75443 2155 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 VDAC2P45880 294 aaPredicted RBP11.36□□□□□ -0.59
CNOT3-210ENST00000618939 LINC00469Q8N7U9 141 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 ZNF324O75467 553 aaPredicted RBP11.36□□□□□ -0.59
CNOT3-210ENST00000618939 CD24P25063 80 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 MYOZ3Q8TDC0 251 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 ZNRD1Q9P1U0 126 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 FNDC10F2Z333 226 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 SIAH2O43255 324 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 NMUP48645 174 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 C12orf54Q6X4T0 127 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 SPACA3Q8IXA5 215 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 FBXL7Q9UJT9 491 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 IGHV3OR16-13A0A075B7E8 117 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 IGHV2-26A0A0B4J1V2 119 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 IGHV3-74A0A0B4J1X5 117 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 A6NDN8 102 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 TIMM23O14925 209 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 RNF224P0DH78 156 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 C14orf144Q96I85 54 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 MIEN1Q9BRT3 115 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 TMEM14BQ9NUH8 114 aa11.36□□□□□ -0.59
CNOT3-210ENST00000618939 ZGRF1Q86YA3 2104 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 MGPP08493 103 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 WNT2P09544 360 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 PRDM13Q9H4Q3 707 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 C10orf142B7Z368 130 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 J3QR89 54 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 PF4V1P10720 104 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 TDGF1P13385 188 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 RNF125Q96EQ8 232 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 CREBBPQ92793 2442 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 CFHR2P36980 270 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 GATA4P43694 442 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 PVRIGQ6DKI7 326 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 MAP1LC3AQ9H492 121 aa11.35□□□□□ -0.59
CNOT3-210ENST00000618939 OR10J3Q5JRS4 329 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 CLEC2AQ6UVW9 174 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 LHFPL4Q7Z7J7 247 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 CIARTQ8N365 385 aaPredicted RBP11.34□□□□□ -0.59
CNOT3-210ENST00000618939 NUDT10Q8NFP7 164 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 TSKUQ8WUA8 353 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 NUDT11Q96G61 164 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 IGHV3OR16-8A0A075B7F1 116 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 CX3CL1P78423 397 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 DUX4L9Q6RFH8 374 aaPredicted RBP11.34□□□□□ -0.59
CNOT3-210ENST00000618939 C8orf46Q8TAG6 207 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 DCAF16Q9NXF7 216 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 MALRD1Q5VYJ5 2156 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 OR4C46A6NHA9 309 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 DLX6P56179 175 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 C17orf58Q2M2W7 97 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 LYPD2Q6UXB3 125 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 WFDC3Q8IUB2 231 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 C11orf53Q8IXP5 236 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 CACNA1BQ00975 2339 aa11.34□□□□□ -0.59
CNOT3-210ENST00000618939 BDP1A6H8Y1 2624 aa11.33□□□□□ -0.6
CNOT3-210ENST00000618939 NPPCP23582 126 aa11.33□□□□□ -0.6
CNOT3-210ENST00000618939 ZNF134P52741 427 aa11.33□□□□□ -0.6
CNOT3-210ENST00000618939 OR10J6PQ8NGY7 276 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms