RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 VMA21Q3ZAQ7 101 aa20.27■□□□□ 0.84
VEGFC-202ENST00000618562 ZNF430Q9H8G1 570 aaPredicted RBP20.27■□□□□ 0.84
VEGFC-202ENST00000618562 IGHV2-70DA0A0C4DH43 119 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 CGB1A6NKQ9 187 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 OR7C2O60412 319 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 GATA2P23769 480 aaPredicted RBP20.26■□□□□ 0.83
VEGFC-202ENST00000618562 WT1-ASQ06250 92 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 MRGPRG-AS1Q2M3A8 158 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 CDPF1Q6NVV7 123 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 EAF1Q96JC9 268 aaPredicted RBP20.26■□□□□ 0.83
VEGFC-202ENST00000618562 SLC25A33Q9BSK2 321 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 SIRPDQ9H106 197 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 DPM3Q9P2X0 92 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 SPG11Q96JI7 2443 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 K7EN84 100 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 AMBPP02760 352 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 C8orf88P0DMB2 117 aa20.26■□□□□ 0.83
VEGFC-202ENST00000618562 PSMB11A5LHX3 300 aa20.25■□□□□ 0.83
VEGFC-202ENST00000618562 CNTFRP26992 372 aa20.25■□□□□ 0.83
VEGFC-202ENST00000618562 SSX2Q16385 188 aa20.25■□□□□ 0.83
VEGFC-202ENST00000618562 LHFPL4Q7Z7J7 247 aa20.25■□□□□ 0.83
VEGFC-202ENST00000618562 A1L4Q6 167 aa20.25■□□□□ 0.83
VEGFC-202ENST00000618562 CNN1P51911 297 aaKnown RBP20.25■□□□□ 0.83
VEGFC-202ENST00000618562 IL36BQ9NZH7 164 aa20.25■□□□□ 0.83
VEGFC-202ENST00000618562 TRAPPC1Q9Y5R8 145 aa20.25■□□□□ 0.83
VEGFC-202ENST00000618562 A0A1W2PRD5 423 aa20.24■□□□□ 0.83
VEGFC-202ENST00000618562 A0A1W2PRE2 83 aa20.24■□□□□ 0.83
VEGFC-202ENST00000618562 A0A1W2PRF3 423 aa20.24■□□□□ 0.83
VEGFC-202ENST00000618562 A0A1W2PRM7 423 aa20.24■□□□□ 0.83
VEGFC-202ENST00000618562 PLXNB1O43157 2135 aa20.24■□□□□ 0.83
VEGFC-202ENST00000618562 HOXB4P17483 251 aaPredicted RBP20.24■□□□□ 0.83
VEGFC-202ENST00000618562 HNF1AP20823 631 aa20.24■□□□□ 0.83
VEGFC-202ENST00000618562 C10orf55Q5SWW7 151 aa20.24■□□□□ 0.83
VEGFC-202ENST00000618562 OR2T6Q8NHC8 308 aa20.24■□□□□ 0.83
VEGFC-202ENST00000618562 FAM168AQ92567 244 aa20.24■□□□□ 0.83
VEGFC-202ENST00000618562 PRDM13Q9H4Q3 707 aa20.24■□□□□ 0.83
VEGFC-202ENST00000618562 TIMM23O14925 209 aa20.23■□□□□ 0.83
VEGFC-202ENST00000618562 ATP5J2P56134 94 aa20.23■□□□□ 0.83
VEGFC-202ENST00000618562 TEX45Q8NA69 505 aa20.23■□□□□ 0.83
VEGFC-202ENST00000618562 OR5R1Q8NH85 324 aa20.23■□□□□ 0.83
VEGFC-202ENST00000618562 HILPDAQ9Y5L2 63 aa20.23■□□□□ 0.83
VEGFC-202ENST00000618562 HELTA6NFD8 242 aa20.23■□□□□ 0.83
VEGFC-202ENST00000618562 CRYGBP07316 175 aa20.23■□□□□ 0.83
VEGFC-202ENST00000618562 C10orf105Q8TEF2 133 aa20.23■□□□□ 0.83
VEGFC-202ENST00000618562 PIMREGQ9BSJ6 248 aa20.23■□□□□ 0.83
VEGFC-202ENST00000618562 COX6B1P14854 86 aa20.22■□□□□ 0.83
VEGFC-202ENST00000618562 CEACAM3P40198 252 aa20.22■□□□□ 0.83
VEGFC-202ENST00000618562 GNG4P50150 75 aa20.22■□□□□ 0.83
VEGFC-202ENST00000618562 YPEL3P61236 119 aaPredicted RBP20.22■□□□□ 0.83
VEGFC-202ENST00000618562 NRGNQ92686 78 aa20.22■□□□□ 0.83
VEGFC-202ENST00000618562 FNDC4Q9H6D8 234 aaPredicted RBP20.22■□□□□ 0.83
VEGFC-202ENST00000618562 DNAJC4Q9NNZ3 241 aa20.22■□□□□ 0.83
VEGFC-202ENST00000618562 CRYBB3P26998 211 aa20.22■□□□□ 0.83
VEGFC-202ENST00000618562 JOSD1Q15040 202 aaPredicted RBP20.22■□□□□ 0.83
VEGFC-202ENST00000618562 MRPL41Q8IXM3 137 aaKnown RBP20.22■□□□□ 0.83
VEGFC-202ENST00000618562 THAP8Q8NA92 274 aa20.22■□□□□ 0.83
VEGFC-202ENST00000618562 ABCA2Q9BZC7 2435 aa20.21■□□□□ 0.83
VEGFC-202ENST00000618562 GGTLC3B5MD39 225 aa20.21■□□□□ 0.83
VEGFC-202ENST00000618562 SELENOTP62341 195 aa20.21■□□□□ 0.83
VEGFC-202ENST00000618562 CENPWQ5EE01 88 aa20.21■□□□□ 0.83
VEGFC-202ENST00000618562 OR1L4Q8NGR5 311 aa20.21■□□□□ 0.83
VEGFC-202ENST00000618562 CFHR4Q92496 578 aa20.21■□□□□ 0.83
VEGFC-202ENST00000618562 FAM167A-AS1Q96KT0 104 aa20.21■□□□□ 0.83
VEGFC-202ENST00000618562 TRAV20A0A0B4J274 112 aa20.2■□□□□ 0.82
VEGFC-202ENST00000618562 TCRBV4S1A1TA0A5B7 111 aa20.2■□□□□ 0.82
VEGFC-202ENST00000618562 VWC2LB2RUY7 222 aa20.2■□□□□ 0.82
VEGFC-202ENST00000618562 OR10J4P0C629 311 aa20.2■□□□□ 0.82
VEGFC-202ENST00000618562 TOX4O94842 621 aa20.2■□□□□ 0.82
VEGFC-202ENST00000618562 ZNF90Q03938 601 aa20.2■□□□□ 0.82
VEGFC-202ENST00000618562 SLC25A2Q9BXI2 301 aa20.2■□□□□ 0.82
VEGFC-202ENST00000618562 SIGLEC9Q9Y336 463 aa20.2■□□□□ 0.82
VEGFC-202ENST00000618562 NAV3Q8IVL0 2385 aa20.19■□□□□ 0.82
VEGFC-202ENST00000618562 IGHV4-61A0A0C4DH41 118 aa20.19■□□□□ 0.82
VEGFC-202ENST00000618562 NDUFS8O00217 210 aa20.19■□□□□ 0.82
VEGFC-202ENST00000618562 PRSS8Q16651 343 aa20.19■□□□□ 0.82
VEGFC-202ENST00000618562 TMEM18Q96B42 140 aa20.19■□□□□ 0.82
VEGFC-202ENST00000618562 TBX15Q96SF7 602 aa20.19■□□□□ 0.82
VEGFC-202ENST00000618562 COX7A2P2O60397 106 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 BPIFB3P59826 476 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 CLEC2AQ6UVW9 174 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 MMD2Q8IY49 270 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 NPIPB3Q92617 1050 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 ERVFC1-1P60608 527 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 RPEL1Q2QD12 228 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 PVRIGQ6DKI7 326 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 PERPQ96FX8 193 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 RNF5Q99942 180 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 LPAR2Q9HBW0 351 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 POLR3KQ9Y2Y1 108 aaPredicted RBP20.18■□□□□ 0.82
VEGFC-202ENST00000618562 V9GYV3 84 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 VPS13CQ709C8 3753 aa20.18■□□□□ 0.82
VEGFC-202ENST00000618562 KMT2BQ9UMN6 2715 aaPredicted RBP20.17■□□□□ 0.82
VEGFC-202ENST00000618562 IGKV1D-37A0A075B6S9 117 aa20.17■□□□□ 0.82
VEGFC-202ENST00000618562 SUMO1P63165 101 aaKnown RBP20.17■□□□□ 0.82
VEGFC-202ENST00000618562 UBE2L3P68036 154 aaKnown RBP20.17■□□□□ 0.82
VEGFC-202ENST00000618562 SSBP2P81877 361 aaPredicted RBP20.17■□□□□ 0.82
VEGFC-202ENST00000618562 TIGITQ495A1 244 aa20.17■□□□□ 0.82
VEGFC-202ENST00000618562 ETFRF1Q6IPR1 90 aa20.17■□□□□ 0.82
VEGFC-202ENST00000618562 DYNAPQ8N1N2 210 aa20.17■□□□□ 0.82
VEGFC-202ENST00000618562 SLC17A3O00476 420 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms