RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 SLC38A11Q08AI6 406 aa11.4□□□□□ -0.58
UBXN1-218ENST00000616865 FHL3Q13643 280 aa11.4□□□□□ -0.58
UBXN1-218ENST00000616865 KIAA0141Q14154 515 aaPredicted RBP11.4□□□□□ -0.58
UBXN1-218ENST00000616865 ZNF343Q6P1L6 599 aa11.4□□□□□ -0.58
UBXN1-218ENST00000616865 ZNF546Q86UE3 836 aa11.4□□□□□ -0.58
UBXN1-218ENST00000616865 TMEM252Q8N6L7 170 aa11.4□□□□□ -0.58
UBXN1-218ENST00000616865 INO80EQ8NBZ0 244 aaPredicted RBP11.4□□□□□ -0.58
UBXN1-218ENST00000616865 CACNG8Q8WXS5 425 aa11.4□□□□□ -0.58
UBXN1-218ENST00000616865 TXN2Q99757 166 aa11.4□□□□□ -0.58
UBXN1-218ENST00000616865 PEF1Q9UBV8 284 aaKnown RBP11.4□□□□□ -0.58
UBXN1-218ENST00000616865 ZNF256Q9Y2P7 627 aaPredicted RBP11.4□□□□□ -0.58
UBXN1-218ENST00000616865 EPPK1P58107 5090 aaKnown RBP11.39□□□□□ -0.59
UBXN1-218ENST00000616865 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.39□□□□□ -0.59
UBXN1-218ENST00000616865 OR2T8A6NH00 312 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 SMLR1H3BR10 107 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 HSPB1P04792 205 aaKnown RBP11.39□□□□□ -0.59
UBXN1-218ENST00000616865 LYL1P12980 280 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 GPR183P32249 361 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 ARL3P36405 182 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 RND2P52198 227 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 EWSR1Q01844 656 aaKnown RBP eCLIP11.39□□□□□ -0.59
UBXN1-218ENST00000616865 AKR1C1Q04828 323 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 MLANAQ16655 118 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 Q5BKY6 102 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 TMEM217Q8N7C4 229 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 OR1S2Q8NGQ3 325 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 ZNF502Q8TBZ5 544 aa11.39□□□□□ -0.59
UBXN1-218ENST00000616865 FNDC4Q9H6D8 234 aaPredicted RBP11.39□□□□□ -0.59
UBXN1-218ENST00000616865 NUPL2O15504 423 aaKnown RBP11.38□□□□□ -0.59
UBXN1-218ENST00000616865 CLEC3BP05452 202 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 S100A11P31949 105 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 DLK1P80370 383 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 RUNX1Q01196 453 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 BAXQ07812 192 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 CASC10Q5T4H9 136 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 ACOT7LQ6ZUV0 252 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 OR1N2Q8NGR9 330 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 NPIPB3Q92617 1050 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 BSCL2Q96G97 398 aaPredicted RBP11.38□□□□□ -0.59
UBXN1-218ENST00000616865 ST6GAL2Q96JF0 529 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 STAB2Q8WWQ8 2551 aa11.38□□□□□ -0.59
UBXN1-218ENST00000616865 TRAV30A0A087WSZ9 112 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 LINC01619G3V211 115 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 I3L521 148 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 NHLH2Q02577 135 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 ZNF616Q08AN1 781 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 ATP6V1FQ16864 119 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 RPEL1Q2QD12 228 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 SPSB3Q6PJ21 355 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 TCTE3Q8IZS6 198 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 OR11H1Q8NG94 326 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 OR4X1Q8NH49 305 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 MUC7Q8TAX7 377 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 CCDC140Q96MF4 163 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 ATP6V0BQ99437 205 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 GGACTQ9BVM4 153 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 HSPB11Q9Y547 144 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 SMAD5-AS1Q9Y6J3 95 aa11.37□□□□□ -0.59
UBXN1-218ENST00000616865 ZFP92A6NM28 416 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 PMS2P5A8MQ11 134 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 PPP5D1E7EU14 171 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 TGOLN2O43493 480 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 PFDN1O60925 122 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 GGCTO75223 188 aaKnown RBP11.36□□□□□ -0.59
UBXN1-218ENST00000616865 CLN5O75503 358 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 ZP3P21754 424 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 OR10J1P30954 320 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 AP2S1P53680 142 aaPredicted RBP11.36□□□□□ -0.59
UBXN1-218ENST00000616865 ARL16Q0P5N6 197 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 GAMTQ14353 236 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 HAPLN4Q86UW8 402 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 TMEM147Q9BVK8 224 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 UQCC1Q9NVA1 299 aa11.36□□□□□ -0.59
UBXN1-218ENST00000616865 BIRC6Q9NR09 4857 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 IGHV4OR15-8A0A075B7B6 117 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 A0A087WW49 117 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 PRSS46E5RG02 174 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 FNDC10F2Z333 226 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 ARPC5O15511 151 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 TRBV12-3P01733 135 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 FABP1P07148 127 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 FCGR2BP31994 310 aaPredicted RBP11.35□□□□□ -0.59
UBXN1-218ENST00000616865 INSL3P51460 131 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 RELQ04864 619 aaPredicted RBP11.35□□□□□ -0.59
UBXN1-218ENST00000616865 CLINT1Q14677 625 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 TMEM116Q8NCL8 245 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 OR5C1Q8NGR4 320 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 RCHY1Q96PM5 261 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 SMIM3Q9BZL3 60 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 NPVFQ9HCQ7 196 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 MRPL36Q9P0J6 103 aaKnown RBP11.35□□□□□ -0.59
UBXN1-218ENST00000616865 TNFSF18Q9UNG2 199 aa11.35□□□□□ -0.59
UBXN1-218ENST00000616865 BMPR1BO00238 502 aa11.34□□□□□ -0.59
UBXN1-218ENST00000616865 DFFBO76075 338 aa11.34□□□□□ -0.59
UBXN1-218ENST00000616865 RAB31Q13636 194 aa11.34□□□□□ -0.59
UBXN1-218ENST00000616865 ZFP69Q49AA0 526 aa11.34□□□□□ -0.59
UBXN1-218ENST00000616865 FAM106AQ4KMX7 169 aa11.34□□□□□ -0.59
UBXN1-218ENST00000616865 AQP10Q96PS8 301 aa11.34□□□□□ -0.59
UBXN1-218ENST00000616865 MFFQ9GZY8 342 aa11.34□□□□□ -0.59
UBXN1-218ENST00000616865 LYSTQ99698 3801 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms